Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N23
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 1.1
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 28 1.1
SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 27 2.0
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 4.5
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 6.0
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 6.0
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 6.0
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 6.0
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 6.0
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 6.0
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 6.0
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 6.0
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 6.0
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 6.0
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 6.0
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 6.0
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 6.0
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 6.0
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 25 7.9
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 7.9
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 25 7.9
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 27.9 bits (59), Expect = 1.1
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 152 LSIAVAKYITISTNN*QHVITSSVLQTAWVPYLNSLG 262
LSI+ AK TI + + + S++L T+W+ +LNS+G
Sbjct: 3546 LSISSAKLSTICRSVLKASVNSALL-TSWICFLNSIG 3581
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 373 RFLDIFEKTFVQSLQKGKFESYG-KKID-FHDEKA 471
+FL+I+ +T + L G E G KK++ +HD KA
Sbjct: 606 QFLEIYNETIIDLLASGNEEEKGKKKLEIYHDTKA 640
>SPAC1F7.06 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 251
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 292 LMTSYYFPFAQRPDNYNLHSVKNYEAIRFLD 384
L+ SYY PF DN ++ V YEA + +
Sbjct: 20 LLNSYYGPFYDDGDNTGVNVVDLYEAFKVFE 50
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 238 GSIPEFSWYSPIKTGYYPLMTSYYFPFAQRP 330
G P+ +Y P + YYP +Y P +P
Sbjct: 107 GGYPQQPYYYPNQPNYYPAQPAYAQPVYAQP 137
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 6.0
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 181 NFYQQLTTRYYFERLTNGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRPDNYNLHS 351
NFY + YF T G+ S+P F + YP S Y P P ++ S
Sbjct: 126 NFYPPIQNSTYFINATGGIDSMPYFG-LNNAPGNIYPF--SMYKPLEADPQYLSVPS 179
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 487 NYWQENAHLYEEERYKDYQR 546
N ++EN H EEERY +Y R
Sbjct: 646 NQFEENLHKLEEERY-EYDR 664
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 340 NLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHDEKAINFVGNYWQENAHLYE 519
NL+S + Y + + +++ S GK+ Y ++ + D + N G Y + N +
Sbjct: 161 NLNSQEFYGRVLNVQKAKRSRPHSPTPGKYMGYDRRRNSRDFPSNNKDGGYRRNNYRDRD 220
Query: 520 EERYKDYQR 546
RY++ R
Sbjct: 221 SNRYRNSYR 229
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 460 DEKAINFVGNYWQ---ENAHLYEEERYKDYQRSYEIVAR 567
D++ I + GN + +N H++ + +KD+ Y V +
Sbjct: 1034 DQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMK 1072
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 391 EKTFVQSLQKGKFESYGKKIDFHDEKAIN 477
EKT V+S+ K + + G DFH E A N
Sbjct: 12 EKTHVESIVKFEDSNRGTITDFHIETANN 40
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 7.9
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 112 HLPFWWSSERYGNLKHRRGEI-YYNFYQQLTTRYYFERLTNGLGSIPEFSWYSP 270
H FWWS + NL E+ NF L FE N + EFS SP
Sbjct: 118 HQKFWWSLRKKRNLPKENSELDLSNFQDDLD----FE---NSISQKNEFSQKSP 164
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 330 RPLSEWEIV*SHQGIVTSLNR-----RVPREFRYGTQAVCKTLEVITC 202
RP + ++V SH+ I+++L + RVP YG KT ++ C
Sbjct: 30 RPANLEDVV-SHKDIISTLEKFISSNRVPHMLFYGPPGTGKTSTILAC 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,456,719
Number of Sequences: 5004
Number of extensions: 52204
Number of successful extensions: 182
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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