Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N23
(575 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24180.1 68417.m03470 pathogenesis-related thaumatin family p... 31 0.73
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 30 1.3
At5g22540.1 68418.m02630 expressed protein contains Pfam profile... 29 1.7
At3g62160.1 68416.m06984 transferase family protein low similari... 29 2.2
At5g49850.1 68418.m06173 jacalin lectin family protein similar t... 28 5.1
At3g52970.1 68416.m05839 cytochrome P450 family protein cytochro... 28 5.1
At4g25350.1 68417.m03648 EXS family protein / ERD1/XPR1/SYG1 fam... 27 6.8
At3g63380.1 68416.m07135 calcium-transporting ATPase, plasma mem... 27 6.8
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 27 9.0
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 27 9.0
At4g14580.1 68417.m02244 CBL-interacting protein kinase 4 (CIPK4... 27 9.0
At3g22910.1 68416.m02887 calcium-transporting ATPase, plasma mem... 27 9.0
At1g17460.1 68414.m02141 myb family transcription factor contain... 27 9.0
>At4g24180.1 68417.m03470 pathogenesis-related thaumatin family
protein similar to SP|P28493 Pathogenesis-related
protein 5 precursor (PR-5) {Arabidopsis thaliana};
contains Pfam profile PF00314: Thaumatin family
Length = 255
Score = 30.7 bits (66), Expect = 0.73
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 291 GIVTSLNRRVPREFRYGTQAVCKT 220
G VT LN++ P E R+G+ + CK+
Sbjct: 165 GCVTDLNQKCPTELRFGSGSACKS 188
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00628: PHD-finger, PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 1648
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 440 ARKLISTMKRQLTLSETIGKRTPICMKKNVTRIINDLMKLSLAMC 574
AR++I T+KR + P+ +++N L+KL A C
Sbjct: 719 AREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACC 763
>At5g22540.1 68418.m02630 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 440
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 364 EAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHDEKAINFV 483
EA LD+ KTFV + + + + K F+D + + FV
Sbjct: 217 EAKHLLDLIRKTFVPVPSQRRIKDHSSKSSFNDHEYLGFV 256
>At3g62160.1 68416.m06984 transferase family protein low similarity
to Taxus cuspidata transferases: 10-deacetylbaccatin
III-10-O-acetyl transferase GI:6746554, taxadienol
acetyl transferase GI:6978038,
2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl
transferase GI:11559716; contains Pfam profile PF02458
transferase family
Length = 428
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 288 IVTSLNRRVPREFRYGTQAVCKTLEVITCC 199
I + L R REFR T +C EVI C
Sbjct: 224 IPSDLIERFKREFRASTGEICSAFEVIAAC 253
>At5g49850.1 68418.m06173 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 596
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/59 (20%), Positives = 25/59 (42%)
Frame = +1
Query: 154 KHRRGEIYYNFYQQLTTRYYFERLTNGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRP 330
K +G F ++ + F + G + WY+P+ GY + ++++P P
Sbjct: 386 KTSKGRTSRTFGERTSDSVEFVIESKGCAVVGFHGWYAPLGAGYITALGAHFYPMPLPP 444
>At3g52970.1 68416.m05839 cytochrome P450 family protein cytochrome
P450 76A2, eggplant, PIR:S38534
Length = 516
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 442 KKIDFHDEKAINFVGNYWQENAHLYEEERYKDYQRSY 552
+K FH EKA G + +E + E E+ + + Y
Sbjct: 242 RKTQFHVEKAFEIAGEFIRERTEVREREKSDEKTKDY 278
>At4g25350.1 68417.m03648 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 745
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 55 RNTHTADIGFNSYYYYFHSHLPFW 126
RNT T++IGF ++Y+ + +P+W
Sbjct: 546 RNTCTSNIGFRTFYFIV-AVIPYW 568
>At3g63380.1 68416.m07135 calcium-transporting ATPase, plasma
membrane-type, putative / Ca(2+)-ATPase, putative
(ACA12) identical to SP|Q9LY77 Potential
calcium-transporting ATPase 12, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 12) {Arabidopsis
thaliana}; similar to SP|Q9LF79 Calcium-transporting
ATPase 8, plasma membrane-type (EC 3.6.3.8)
(Ca2+-ATPase, isoform 8) {Arabidopsis thaliana};
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 1033
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 461 MKRQLTLSETIGKRTPICMKKNVTRIINDL 550
M R+L+ ET+G T IC K T +N++
Sbjct: 434 MVRKLSACETMGSATVICTDKTGTLTLNEM 463
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 229 NGLGSIPEFSWYSPIKTGYYPLMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFE 393
+GL +IP +W + +TG + + P D V NYE L+ F+
Sbjct: 1004 SGLSNIPIANWDTKFETGTKTALLHPFSPIVVAADENERIRVWNYEEATLLNGFD 1058
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 443 RKLIS--TMKRQLTLSETIGKRTPICMKKNVTRIINDL 550
RK+++ + R+L+ ET+G T IC K T +N++
Sbjct: 455 RKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEM 492
>At4g14580.1 68417.m02244 CBL-interacting protein kinase 4 (CIPK4)
identical to CBL-interacting protein kinase 4
[Arabidopsis thaliana] gi|13249503|gb|AAG01367;
identical to cDNA calcineurin B-like (CBL) interacting
protein kinase 4 (CIPK4) GI:13249502
Length = 426
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 571 HGERQFHKIVDNPCNVLLHTDGRSLANSFRQS*LPFHRGNQFSCHT 434
H + H+ V P N+LL G + F S LP HR N HT
Sbjct: 137 HRDGIAHRDV-KPQNLLLDKQGNLKVSDFGLSALPEHRSNNGLLHT 181
>At3g22910.1 68416.m02887 calcium-transporting ATPase, plasma
membrane-type, putative / Ca(2+)-ATPase, putative
(ACA13) identical to SP|Q9LIK7 Potential
calcium-transporting ATPase 13, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 13) {Arabidopsis
thaliana}; similar to SP|Q9LF79 Calcium-transporting
ATPase 8, plasma membrane-type (EC 3.6.3.8)
(Ca2+-ATPase, isoform 8) {Arabidopsis thaliana};
contains InterPro Accession IPR006069: Cation
transporting ATPase
Length = 1017
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 455 STMKRQLTLSETIGKRTPICMKKNVTRIINDL 550
+ M R+L+ ET+G T IC K T +N +
Sbjct: 428 NAMVRKLSACETMGSATVICTDKTGTLTLNQM 459
>At1g17460.1 68414.m02141 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 604
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 374 GSWTFLKRLSYSPY 415
G WT +K+LS+SPY
Sbjct: 517 GKWTEIKKLSFSPY 530
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,467,896
Number of Sequences: 28952
Number of extensions: 256000
Number of successful extensions: 750
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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