Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N22
(560 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6T283 Cluster: Predicted protein; n=2; core eudicotyle... 35 1.5
UniRef50_Q9NQX0 Cluster: PR domain zinc finger protein 6; n=27; ... 33 3.4
UniRef50_Q4S496 Cluster: Chromosome 1 SCAF14742, whole genome sh... 33 4.6
UniRef50_Q1DPA2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q9VHL6 Cluster: CG33720-PA, isoform A; n=3; Drosophila ... 33 6.0
UniRef50_A6BLV2 Cluster: HAP2 subunit of HAP complex; n=6; Oryza... 32 8.0
UniRef50_Q7YSH5 Cluster: Putative uncharacterized protein din-1;... 32 8.0
>UniRef50_Q6T283 Cluster: Predicted protein; n=2; core
eudicotyledons|Rep: Predicted protein - Populus tremula
x Populus alba
Length = 868
Score = 34.7 bits (76), Expect = 1.5
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 316 SKALAAAEEQVSARLPCSRIHHASLASLAYRASFRRLQYLLFDSNNLVSALPNSSKTVTN 495
S AL A+++ + LPC H S AS A + SF + +NN VS N + N
Sbjct: 339 SNALVGADKKSYSELPCLPHSHVSYASQALKESFCPISSSFLYNNNFVSQQTNMETSGVN 398
Query: 496 SARTFQGALSTP 531
+ + + P
Sbjct: 399 KQTSKRPSFYVP 410
>UniRef50_Q9NQX0 Cluster: PR domain zinc finger protein 6; n=27;
Eumetazoa|Rep: PR domain zinc finger protein 6 - Homo
sapiens (Human)
Length = 608
Score = 33.5 bits (73), Expect = 3.4
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = -2
Query: 247 THLPTHDVTTICGIVYFIC--GKANITTTISWRRGRGQEHKYVLV*RGSEISMSRRCIRG 74
TH TH +T C +V C GK T RG GQ + V G+++ R +RG
Sbjct: 11 THTHTHSLTLFCAVVKPTCPAGKLPERGTKEPGRGSGQAQQPTAVESGAQVRPHSRALRG 70
Query: 73 RG*HRSARQG 44
+ R G
Sbjct: 71 PPNFLACRSG 80
>UniRef50_Q4S496 Cluster: Chromosome 1 SCAF14742, whole genome shotgun
sequence; n=5; Euteleostomi|Rep: Chromosome 1 SCAF14742,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 2660
Score = 33.1 bits (72), Expect = 4.6
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 257 PTSHALANTRRHHNMRYSLFYLRKSEYNHHDFV--AARARSGAQVC 126
P+ +A+TRRH N ++S+ +L K+ H DF R R+ A++C
Sbjct: 1647 PSGSLIASTRRHPN-KHSVVFLEKNGLLHGDFTLPLGRDRAKAKIC 1691
Score = 32.3 bits (70), Expect = 8.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 257 PTSHALANTRRHHNMRYSLFYLRKSEYNHHDFVAARARSGAQV 129
P+ +A+TRRH N ++S+ +L K+ H DF R A+V
Sbjct: 249 PSGSLIASTRRHPN-KHSVVFLEKNGLLHGDFTLPLGRDRAKV 290
>UniRef50_Q1DPA2 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 402
Score = 33.1 bits (72), Expect = 4.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 168 RFRGGAGAVRSTSM---YSYSGVAKLVCLGVVYAGAVDTEVHDREKG 37
R RG G S +M YS +GV L+ LGV+ GAV +H G
Sbjct: 61 RDRGNNGPTTSVAMIILYSVTGVITLLFLGVILTGAVRAHMHPERYG 107
>UniRef50_Q9VHL6 Cluster: CG33720-PA, isoform A; n=3; Drosophila
melanogaster|Rep: CG33720-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1041
Score = 32.7 bits (71), Expect = 6.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 439 FDSNNLVSALPNSSKTVTNSARTFQGALSTPQNKCCSS 552
F + +++LP+ S T S T+ AL P++ CCSS
Sbjct: 196 FGRSKSLASLPSKSNPPTQSGVTWLSALKDPESTCCSS 233
>UniRef50_A6BLV2 Cluster: HAP2 subunit of HAP complex; n=6; Oryza
sativa|Rep: HAP2 subunit of HAP complex - Oryza sativa
subsp. japonica (Rice)
Length = 317
Score = 32.3 bits (70), Expect = 8.0
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Frame = +1
Query: 226 RRVLASA*DVGSPSVCNSKELSGGCERIYTSKALAAAEEQVSARLPC---SRIHHASLAS 396
R LA V P N+K+ + R T L A + V R P SR HHA +
Sbjct: 153 RMPLAVDPSVEEPIFVNAKQYNAILRRRQTRAKLEAQNKAVKGRKPYLHESRHHHAMKRA 212
Query: 397 LAYRASFRRLQYLLFDSNNLVSALPN--SSKTVTNSARTFQGALSTPQNKCCSSSS 558
F + LL P S+++ T ART GA+ +N C +S+
Sbjct: 213 RGSGGRFLTKKELLEQQQQQQQQKPPPASAQSPTGRARTSGGAVVLGKNLCPENST 268
>UniRef50_Q7YSH5 Cluster: Putative uncharacterized protein din-1; n=4;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein din-1 - Caenorhabditis elegans
Length = 2407
Score = 32.3 bits (70), Expect = 8.0
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 5 RHLVWLPKTPTPFSLSCTSVST----APAYTTPRHTNFATPLY-EYILVLLTAPAPPRNR 169
++L+ +P P P ++ TS T + A++TPRH+ TP++ E + P P++R
Sbjct: 908 QNLLTMPIVPPPHLIAATSTGTHSVSSSAHSTPRHSISGTPVHCEPSNSKTSQPPTPKSR 967
Query: 170 GGYIRFSANKINYTAYCGDVVCWQVREMS 256
++ + I+ + + Q R S
Sbjct: 968 PEKVQIRHDTISKSGPSNAINALQARSQS 996
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,962,887
Number of Sequences: 1657284
Number of extensions: 12184321
Number of successful extensions: 39602
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39539
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -