Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N22
(560 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0534 + 4206360-4206776 30 1.5
01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982 30 1.5
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 1.9
11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333 29 2.5
11_08_0014 - 27631971-27632374,27632486-27635402 29 2.5
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 29 3.4
09_03_0107 + 12412772-12413097,12413460-12413732,12414163-12414247 28 4.4
06_03_1486 + 30470838-30472460 28 4.4
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 28 4.4
09_02_0133 + 4707944-4708308,4708320-4708534,4708626-4708672,470... 28 5.9
08_01_0045 + 322679-323347 28 5.9
07_01_0457 - 3468419-3468585,3469674-3469842,3470339-3470384,347... 28 5.9
04_03_0832 + 20139299-20139520,20139822-20141114,20142697-201428... 28 5.9
02_03_0250 - 16832371-16833016,16833130-16833287,16834393-16834413 28 5.9
01_03_0124 + 12734846-12735356,12735449-12736041 28 5.9
11_08_0002 - 27477335-27477841 27 7.7
08_02_1435 + 27079184-27082006 27 7.7
05_04_0430 - 21171947-21171990,21172468-21172543,21172588-211726... 27 7.7
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 27 7.7
02_01_0701 + 5238179-5238461,5238540-5238949,5240413-5240793,524... 27 7.7
02_01_0302 - 2021221-2023305 27 7.7
01_06_1714 - 39368509-39369153,39369607-39369850,39369995-393701... 27 7.7
>12_01_0534 + 4206360-4206776
Length = 138
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = -3
Query: 414 AGAVGQTGKGSVVDAGTRKSCTDLFLSSSKRLRRVDPLATARKLLRITHGGASDISRTC 238
A AVG+ K V A K D +S R+RR A AR L+ T GG + S C
Sbjct: 63 AAAVGK--KEEVAAAAVEKK-QDPAAASPARMRRSGDRAPARMWLQYTWGGGGEASEVC 118
>01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982
Length = 406
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = +1
Query: 259 SPSVCNSKELSGGCERIYTSKALAAAEEQVSARLPCSRIHHASLAS 396
S S NSKE ER Y A AAA+EQ+ PC R S+ +
Sbjct: 38 SNSNSNSKEAEEEDEREYF--AAAAADEQLQVEAPCGRRRRESMVN 81
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 24 LKPPPPFPCRALLCQPRP 77
L+PPPP P ++C+P P
Sbjct: 264 LRPPPPLPVPGVICRPPP 281
>11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333
Length = 1061
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 388 LASLAYRASFRRLQYLLFDSNNLVSALPNSSKTVTNSARTFQG 516
L+ L+ + R+LQYLL N+ +LPN ++ F+G
Sbjct: 395 LSFLSSLCNCRQLQYLLISHNSFTGSLPNYVGNLSTELLGFEG 437
>11_08_0014 - 27631971-27632374,27632486-27635402
Length = 1106
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 388 LASLAYRASFRRLQYLLFDSNNLVSALPNSSKTVTNSARTFQG 516
L+ L+ + R+LQYLL N+ +LPN ++ F+G
Sbjct: 440 LSFLSSLCNCRQLQYLLISHNSFTGSLPNYVGNLSTELLGFEG 482
>11_06_0109 +
20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 370 RIHHASLASLAYRA--SFRRLQYLLFDSNNLVSALPNS-SKTVTNSARTFQGALSTP 531
R+ H S + R+ L +L SNN+ A+PNS SK + + ++GA TP
Sbjct: 732 RLSHNSFSGDIPRSITKLTNLHHLDLASNNISGAIPNSLSKILAMIGQPYEGADQTP 788
>09_03_0107 + 12412772-12413097,12413460-12413732,12414163-12414247
Length = 227
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1
Query: 374 MREQGSRALTCSSAAASA 321
MR+ G RA TCS+AAA+A
Sbjct: 1 MRKAGRRAFTCSAAAAAA 18
>06_03_1486 + 30470838-30472460
Length = 540
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +1
Query: 328 AAAEEQVSARLPCSRIHHASLASLAYRASFRRLQYLLFDSNNLVSALPNSSKTVTNSART 507
A + Q+ RLP S LA++ A++ LL D L+ PN++ N+
Sbjct: 38 APTQNQLPRRLPLS------LAAVREAATWPADAVLLPDWEVLLLLHPNATAIAHNATCA 91
Query: 508 FQGALSTP 531
FQGA S+P
Sbjct: 92 FQGAASSP 99
>02_01_0471 -
3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Frame = +2
Query: 35 TPFSLSCTS-VSTAPAYTTPRHTNFATPLYEYILVLLTAPAPPRNRGGYIRFSANKINYT 211
T SL+ S S T T ++ L + L P RN G + +
Sbjct: 406 TGISLTSESFASPIDILDTTEWTEYSVKLSIALCSFLLPPNEIRNSSGAVDSQVSLSISV 465
Query: 212 AYCGDVVCWQVREMSEAPPCV 274
AYC W ++ +S PC+
Sbjct: 466 AYCEQCARWIIKVLSTVFPCI 486
>09_02_0133 +
4707944-4708308,4708320-4708534,4708626-4708672,
4708997-4709393,4710042-4710608,4710708-4710838,
4711274-4711747
Length = 731
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = -2
Query: 253 HLTHL--PT--HDVTTICGIVYFICGKA 182
HL H+ PT ++ T+CGI YF C +A
Sbjct: 403 HLNHVRGPTLHENLRTVCGITYFTCREA 430
>08_01_0045 + 322679-323347
Length = 222
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -3
Query: 429 LETPEAGAVGQTGKGSVVDAGTRKSCTDLFLSSSKRLRRVDPLATARKLLR--ITHGGAS 256
L+ +VG G + G + L S S R R +A R L R + H G S
Sbjct: 143 LDVSRRRSVGGAGLAEKREGGGGAAVLGLGASRSSRRRAPGLVAMMRSLKRMLVAHKGKS 202
Query: 255 DISRTCQHTTS 223
+ ++ HTT+
Sbjct: 203 KVHKSDDHTTA 213
>07_01_0457 -
3468419-3468585,3469674-3469842,3470339-3470384,
3470671-3470753,3471395-3471474,3472320-3472428,
3472667-3472735,3472874-3472924,3473059-3473184,
3473312-3473435,3473617-3473672,3473790-3473854,
3474438-3474513,3475050-3475108,3475275-3475365,
3475490-3475990
Length = 623
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = -1
Query: 356 RALTCSSAAASAFDV*IRSQPPESSLELHTEGLPTSHALANTRRHHNMRYSLFYLRKSEY 177
RA+ S AAA F PP + + TS + + + NM YS ++ +
Sbjct: 233 RAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYS-YFTSDTYA 291
Query: 176 NHHDFVAARARSGAQVCTRIA 114
N H AA+ +G +C +A
Sbjct: 292 NGHSACAAKLAAG--ICADLA 310
>04_03_0832 +
20139299-20139520,20139822-20141114,20142697-20142822,
20143322-20143442,20144213-20144481
Length = 676
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 301 ERIYTSKALAAAEEQVSARLPCSRI---HHASLASLAYRASFRRLQYLLFDSNNLVSALP 471
E +AL A + RL + HHASL L+ R + RR + L +L++ +P
Sbjct: 232 EDAVVERALGDAPDTELTRLAADYLRSTHHASLLCLSLRRALRRARALYGPITDLLALIP 291
Query: 472 NS 477
++
Sbjct: 292 HA 293
>02_03_0250 - 16832371-16833016,16833130-16833287,16834393-16834413
Length = 274
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 325 LAAAEEQVSARLPCSRIHHASLASLAYRASFRRLQYLLFDSNNLVSALPNSSKTVTNSA 501
LA + V+ R +RI+HA + A+FRR+ L ++ + A P ++ V S+
Sbjct: 4 LACQSQAVTVRALRARIYHAVAPAELLLAAFRRVSVLAEEAAAALPADPADAECVAGSS 62
>01_03_0124 + 12734846-12735356,12735449-12736041
Length = 367
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 30 PPPPFPCRALLCQPRPRIQRLDILISLPRYTSTYLCS*PRPRRHEI 167
PPPP P + C R R + +Y+ Y C + +R+++
Sbjct: 29 PPPPPPLQRPSCDKSDREMRFMFSQWMSKYSKRYSCPEEQEKRYQV 74
>11_08_0002 - 27477335-27477841
Length = 168
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -3
Query: 429 LETPEAGAVGQTGKGSVVDAGTRKSCTDLFLSSSKRLRRVDPLATARKLLRITHGGAS 256
L T A VG+T +V AG + + ++ L++ DPL T + + GGA+
Sbjct: 62 LPTTAATIVGRTTTMTVAAAGATSAALMMAGCTATGLKQEDPLLTTAGMTVVAVGGAT 119
>08_02_1435 + 27079184-27082006
Length = 940
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 283 ELSGGCERIYTSKALAAAEEQVSARLP--CSRIHHASLASLAYRASFRRLQYLLFDSNNL 456
+LSG CE + + + L +E +S LP SR+ + + +++ L L F + +
Sbjct: 337 QLSGWCEHMASLEVLDLSENSLSGVLPTSISRLSNLTYLDISFNKLIGELSELHFTNLSR 396
Query: 457 VSALPNSSKT 486
+ AL +S +
Sbjct: 397 LDALVLASNS 406
>05_04_0430 -
21171947-21171990,21172468-21172543,21172588-21172699,
21174080-21174186
Length = 112
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 193 K*NKLYRILW*RRVLASA*DVGSPSVCNSKELSGGCERIYTSKAL 327
K +K+YR LW RV S+ +VG + +LSG ++I K L
Sbjct: 70 KKSKVYRYLWIERVTGSSFEVG----LDDLKLSGNNDQILQKKTL 110
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 PTPFSLSCTSVSTAPA-YTTPRHTNFATPLYEYILVLLTAPAPPRNRGGY 178
PTPF+ SV+ APA P+ + A+ + AP PPR R +
Sbjct: 5 PTPFAGKRRSVAAAPAKIAAPKPKSIASTRTKTTRKSPPAPPPPRPRRAF 54
>02_01_0701 +
5238179-5238461,5238540-5238949,5240413-5240793,
5241112-5241244,5241495-5241622,5241714-5241914
Length = 511
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 220 TICGIVYFICGKANIT 173
T+CG+ YF C KA+I+
Sbjct: 220 TVCGLAYFSCEKADIS 235
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 23 PKTPTPFSLSCTSVSTAPAYTTPRHTNFATPLYEY 127
P P+P S S S +P +TP H ++ +P Y
Sbjct: 516 PSHPSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTY 550
>01_06_1714 -
39368509-39369153,39369607-39369850,39369995-39370191,
39370607-39370708,39370826-39371026,39371138-39371381,
39371813-39371983,39372450-39372751
Length = 701
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 15 CGFLKPPPPFPCRALLCQPRPRIQR 89
C L PPPPFP + + P ++R
Sbjct: 294 CNRLFPPPPFPREVEMMESDPNVKR 318
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,090,015
Number of Sequences: 37544
Number of extensions: 397163
Number of successful extensions: 1731
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1728
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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