Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N22
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    24   1.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   4.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   8.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.5  

>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 245 ALANTRRHHNMRYSLFYLRKSEYNHHDF 162
           +L+N   H+N  Y   Y  K  YN++++
Sbjct: 84  SLSNKTIHNNNNYKYNYNNKYNYNNNNY 111


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 361 PCSRIHHASLASLAY 405
           PC R+H + +  L+Y
Sbjct: 55  PCQRVHSSRIPDLSY 69


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +2

Query: 227 VVCWQVREMSEAP 265
           +VCW+V    E P
Sbjct: 826 IVCWEVMSYGERP 838


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 277 NYTRRGFRHLTHLPTHDVTTICGIVYFI 194
           NY +RG + LT +     T    I+ F+
Sbjct: 320 NYLKRGGKTLTSISVESNTMFINILKFL 347


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 308 IRSQPPESSLELHTEGLPTSHALANTRRHHNM 213
           I +  P  S +LH   L TSH L      H++
Sbjct: 147 INNTQPMCSPKLHVFDLNTSHQLKQVVMPHDI 178


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 248 HALANTRRHHNMRYSLFYLRKSEYNHH 168
           H L+ T+    M+    YL++ +  HH
Sbjct: 81  HILSPTQLQSFMQQHSLYLQQQQQQHH 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,411
Number of Sequences: 438
Number of extensions: 3765
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)