Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N20
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.14c ||SPAC23A6.14c|DUF1748 family protein|Schizosacchar... 28 0.60
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 26 3.2
SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr 1|||... 25 4.2
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 4.2
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 25 5.6
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|... 25 5.6
SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr 1|... 25 7.3
SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces po... 25 7.3
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 24 9.7
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 24 9.7
>SPAC26A3.14c ||SPAC23A6.14c|DUF1748 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 73
Score = 28.3 bits (60), Expect = 0.60
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -3
Query: 451 FGVHVEIFVNCLGSVERHTPMTLEEYNIEKCD--SCVWIYGVFSDWRFDMPPGFL 293
+GV + + C+ + R + ++ E I D + V Y F +W FD FL
Sbjct: 10 YGVDLALVSTCVAGIRRSSGISFEVEKIHNEDVKTAVEKYLNFGEWAFDQSSAFL 64
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.8 bits (54), Expect = 3.2
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 184 SILVPDVHFISHSEEIRIHPRKLPT*AAVLVDRRYI--FCTTQEIGDLFLA 38
S+ P+V F H++E+ +PR +PT + +D + TT D+F A
Sbjct: 1969 SVSTPEVRF--HADEVSNYPRHVPTDSHGSLDENSLGELVTTLHSLDVFFA 2017
>SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 600
Score = 25.4 bits (53), Expect = 4.2
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 7 VPLQRRSR*TKPR----RDHQSLGWCKIYIACQQVQQLK*AVFGDESGFLHYG 153
VP+ + TKP RD +SLG IAC+ Q L+ +V S F H G
Sbjct: 183 VPVINGEQKTKPTQQAIRDLRSLGITPDLIACRCKQPLEKSVIDKISLFCHVG 235
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 25.4 bits (53), Expect = 4.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 5 LSLYREGAGKQSQEEITNLLG-----GAKYISPVNKY 100
+ L E AG ++ N LG GAK++ P+ KY
Sbjct: 219 IRLLEEVAGNSKGPDLANKLGTVEINGAKHLGPIGKY 255
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 25.0 bits (52), Expect = 5.6
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = -1
Query: 177 WFPTYILLAIVKKSGFIP---ENCL-LKLL 100
+FPT +L +V +S F+P ENC L+LL
Sbjct: 245 FFPTILLYPLVYQSDFVPSVSENCTPLELL 274
>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 5.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 164 YVGNQYTLNEWFTITARQYESEIDTIDFKDTKK 262
YVG + + + + R Y +DTI K T+K
Sbjct: 38 YVGGLHAIYYFPKLNPRNYHKFVDTISRKPTRK 70
>SPAC13G7.12c |||choline kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 24.6 bits (51), Expect = 7.3
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -3
Query: 451 FGVHVEIFVNCLGSVERHTPMTLEEYNIEKCDSCVWIYGVFSDWRFD--MPPGFLVCPLI 278
+G HVE+F+N VE L +NI ++ G FS+ RF+ M L C I
Sbjct: 95 YGPHVELFIN--RQVELENLKRLARHNIGP-----YLIGEFSNGRFEQYMESTTLTCKTI 147
>SPAC25A8.03c ||SPAC3C7.15c|DUF185 protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 467
Score = 24.6 bits (51), Expect = 7.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 149 MANKMYVGNQYTLNEWFTITARQYESEID 235
M + ++G ++ LNE+FT+ Q S ++
Sbjct: 256 MMERCWLGPEHFLNEFFTLNTHQKVSSLN 284
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 24.2 bits (50), Expect = 9.7
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 192 NGSRLLLVSTKARSTLLTSKTPKRQLTLSISGQTRKPGGISNLQSLKTP 338
N RLLLVS + TS +P R L+ +I+ + + +S TP
Sbjct: 465 NKKRLLLVSQEKERKGYTSASPDRPLSQTITESSVAKTKSTTPKSTDTP 513
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 24.2 bits (50), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 412 SVERHTPMTLEEYNIEKCDSCVWIY 338
+++R P TLEE N + D W Y
Sbjct: 67 NLKRFNPTTLEENNSDLSDMSSWDY 91
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,065,288
Number of Sequences: 5004
Number of extensions: 42936
Number of successful extensions: 135
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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