Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N20
(459 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 54 6e-08
01_01_1152 + 9170628-9171899 54 6e-08
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 52 2e-07
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 48 4e-06
11_02_0011 - 7337618-7338496,7338596-7338991 47 6e-06
11_01_0771 + 6453130-6454488 47 6e-06
11_01_0767 + 6438648-6438809,6439146-6440000 46 1e-05
11_01_0750 - 6315126-6315896,6316371-6316784 46 1e-05
11_02_0012 - 7346282-7347136,7347234-7347593 45 3e-05
11_02_0014 - 7352619-7352918,7353173-7353418 42 2e-04
05_06_0044 - 25150322-25151260 37 0.009
02_04_0309 - 21924042-21925580 29 1.8
12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422... 28 4.2
06_01_0807 - 6069998-6071326 27 5.5
03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,874... 27 5.5
08_02_0094 + 12277756-12278574,12280314-12280418,12280487-122805... 27 7.3
07_01_1069 - 9493001-9493176,9493269-9493300,9493405-9493499,949... 27 7.3
04_03_0673 - 18562497-18563010,18563080-18563471,18563553-185636... 27 7.3
10_08_0919 + 21564245-21565699,21566876-21567022,21567170-215672... 27 9.6
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 27 9.6
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 54.0 bits (124), Expect = 6e-08
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +2
Query: 152 ANKMYVGNQYTLNEWFT-ITARQYESEIDTIDFKDT-KKAADIINQWANEKTRGHIKSPI 325
AN ++V L + + A +Y +E + F+D ++A IN+W T G IK +
Sbjct: 102 ANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKDFL 161
Query: 326 AEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFHV 442
+D +D L N ++F+G W F+A T D F++
Sbjct: 162 PKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>01_01_1152 + 9170628-9171899
Length = 423
Score = 54.0 bits (124), Expect = 6e-08
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Frame = +2
Query: 5 LSLYREGAGKQSQEEITNLLGGAK----YISPVNKYSSLSRQFSGMNPDFFTMANKMYVG 172
L+L +GA ++Q E+ LG + SP + + R N F A ++V
Sbjct: 72 LALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLP--NTSF---ACGVWVD 126
Query: 173 NQYTLN-EWFTITARQYESEIDTIDFK-DTKKAADIINQWANEKTRGHIKSPIAEDTIDP 346
L E+ A +Y + + DF ++A + +N + ++ T G I+ + +++D
Sbjct: 127 RGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPNSVDS 186
Query: 347 DAAVALFNVIFFQGHWSVPFNATKTVDKDFHV 442
V L N + F+G WS+PF+ + T FH+
Sbjct: 187 STVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 143 FTMANKMYVGNQYTLNEWFTITARQYESEIDTIDFKDTKKAADIINQWANEKTRGHIKSP 322
FT+ +YV + I + + + I + A +N W + T G IK
Sbjct: 173 FTIVGIIYVIMWFPFTAILEIMSLKDDEPITHWTSGKAAEVASQVNSWVEKVTSGLIKEI 232
Query: 323 IAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFH-VDSKTI 457
+ ++D + L N ++F+G W+ F+A+KT D +FH +D K++
Sbjct: 233 LPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSV 278
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +2
Query: 275 INQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFHV 442
+N W + T G IK+ +I+ + + L N ++F+G W+ F+ +KT D +FH+
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHL 524
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +2
Query: 5 LSLYREGAGKQSQEEITNLLGGAKYISPVNKYSSLSRQF-----SGMNPDFFTMANKMYV 169
LSL GAG +++++ + LGG ++ ++ Q SG A+ ++V
Sbjct: 48 LSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADASGAGGPRVAFADGVFV 107
Query: 170 GNQYTLNEWF-TITARQYESEIDTIDFK 250
+L + F + +Y++E ++DF+
Sbjct: 108 DASLSLKKTFGDVAVGKYKAETHSVDFQ 135
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 260 KAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFH 439
+ A +N W + T G IK + ++D + L N ++F+G W+ F+A+KT D +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 440 -VDSKTI 457
+D K++
Sbjct: 64 LLDGKSV 70
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 47.2 bits (107), Expect = 6e-06
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +2
Query: 248 KDTKKAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVD 427
+ K++ IN+W ++ T I + + ++ D A+ L N I+F+G WS PF + T
Sbjct: 131 RQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTT 190
Query: 428 KDFH 439
FH
Sbjct: 191 GKFH 194
>11_01_0771 + 6453130-6454488
Length = 452
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +2
Query: 230 IDTIDFKDTKKAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFN 409
+D + K ++A IN WA T I + ++ P+ AV L N I+F+G W PFN
Sbjct: 163 LDLVSEK-AEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFN 221
Query: 410 ATKTVDKDFH 439
+ T K F+
Sbjct: 222 ESDTERKPFY 231
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 218 YESEIDTIDFKDTK-KAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHW 394
Y+ T+DFK+ +A IN W T+ I I ++ D + N I+F+G W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 395 SVPFNATKTVDKDF 436
PF+ + T +++F
Sbjct: 102 LAPFDKSDTAEREF 115
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 191 EWFTITARQYESEIDTIDFKDTKK-AADIINQWANEKTRGHIKSPIAEDTIDPDAAVALF 367
E+ + Y S DFK+ + A D IN W + T+G + + + TID + + L
Sbjct: 117 EFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGLVLG 176
Query: 368 NVIFFQGHWSVPFNATKTVDKDFH 439
+ ++F+G W + +T ++ F+
Sbjct: 177 SALYFRGRWLDRDDLRRTTEQKFY 200
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 242 DF-KDTKKAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATK 418
DF + K + IN+W ++ T I+ + + ++ A+ L N I+F+G WS PF +
Sbjct: 116 DFQRQPKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRER 175
Query: 419 TVDKDFH 439
T FH
Sbjct: 176 TTTGKFH 182
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 251 DTKKAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDK 430
+ KK+ IN+W ++ T I + + ++ + L N I+F+G WS PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 431 DFH 439
FH
Sbjct: 142 KFH 144
>05_06_0044 - 25150322-25151260
Length = 312
Score = 36.7 bits (81), Expect = 0.009
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 11/67 (16%)
Frame = +2
Query: 275 INQWANEKTRGHIKSPIAEDTIDPD-----------AAVALFNVIFFQGHWSVPFNATKT 421
IN+W + +T G +K ++ D D A+V L N ++F +W PF T
Sbjct: 40 INEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLT 99
Query: 422 VDKDFHV 442
+ DFHV
Sbjct: 100 EEGDFHV 106
>02_04_0309 - 21924042-21925580
Length = 512
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 310 MPPGFLVCPLIDNVSCLFGVFEVNSVDLAFV 218
+PPG PLI N+ CL G+F LA V
Sbjct: 39 LPPGPTPLPLIGNLLCLGGIFHQTLAKLARV 69
>12_01_1080 + 11241590-11241625,11241723-11242018,11242113-11242269,
11242381-11242449,11242551-11243480,11243868-11243906,
11244414-11244478,11244663-11244768,11244850-11245050,
11247001-11247201,11247756-11247779,11249425-11249586,
11249676-11249915,11250267-11250479,11250618-11250968,
11251041-11251193,11251649-11251858,11252049-11252267,
11252365-11252482,11252879-11253828,11254023-11254220,
11254294-11254553,11255316-11255505,11255817-11256169,
11258278-11258386,11258466-11258615,11258748-11258844,
11259315-11259415
Length = 2065
Score = 27.9 bits (59), Expect = 4.2
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Frame = +2
Query: 2 LLSLYREGAGKQSQEEITNLLGGAKYISPVNKYSSLSRQFSGMNPDFFTMANKMYVGNQY 181
+L+ R AG+ + E + + G+ S ++ Q GM+ TM N V +
Sbjct: 646 MLTKLRYAAGEGNSESSSGEISGS---SSGKMDATHGLQIIGMSA---TMPNVAAVADWL 699
Query: 182 TLNEWFTITARQYESEIDTIDFKDTKKAADIINQWANEKTRGHIKSPIAE-DTIDPDAAV 358
+E FT A Y++E + ++ K + + + + + +A+ DPD V
Sbjct: 700 QKDEEFTAQAALYQTEFRPVPLEEFIKVGNQV--FDKDMNVVRVLPKVADLGGKDPDHIV 757
Query: 359 ALFNVIFFQGH 391
L N + QGH
Sbjct: 758 ELCNEVVQQGH 768
>06_01_0807 - 6069998-6071326
Length = 442
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 269 DIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVI 376
D I +W GH+ P+ + PDAA A NV+
Sbjct: 180 DCIGEWL----AGHVTCPVCRCNLAPDAAAAEANVV 211
>03_02_0473 + 8745721-8745994,8746083-8746090,8746232-8746324,
8746665-8746893,8747314-8747420,8747560-8747622,
8747883-8747983,8748996-8749090,8749330-8749350,
8749987-8750082,8750188-8750308,8750415-8750570,
8750679-8750869,8751207-8751478,8751853-8751954,
8752006-8752038,8752132-8752308,8752397-8752466,
8752512-8752585,8752667-8752908,8752983-8753129,
8753526-8753751,8753893-8753970,8754378-8754521,
8754829-8755008,8755335-8755394,8755484-8755523,
8758653-8759137
Length = 1294
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 65 GGAKYISPVNKYSSLSRQFSGMN-PDFFTMANKMYVGNQYTLNE 193
GG+ S + +S+S FSGMN P F+ Y +Q T+ E
Sbjct: 1000 GGSSPESTGSVETSISSHFSGMNYPSLFSSKPSGYGASQQTIRE 1043
>08_02_0094 +
12277756-12278574,12280314-12280418,12280487-12280543,
12280969-12281041,12281525-12281703,12281788-12281961,
12282041-12282326,12282433-12282509,12282599-12282668,
12282751-12282822,12282920-12283155,12283240-12283374,
12283466-12283761,12284237-12284408,12284510-12284608,
12284704-12284835,12284950-12285050,12285426-12285615,
12285723-12285761
Length = 1103
Score = 27.1 bits (57), Expect = 7.3
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = -3
Query: 385 LEEYNIEKCDSCVWIYGVFSDWRFDMPPGFLVCPLIDNVSCLFGVFEVNSVDL------A 224
+++ N E C++ + +D +P +VC I+N C+ F N D+ A
Sbjct: 545 VDDTNTEGCNAVPSRFDDNADVDASIPDDVVVCTPIENDPCV-NSFVANGDDVIASGHAA 603
Query: 223 FVLTSSNREPFIQSILVPDVHFI 155
+++SSNR+ F +L P F+
Sbjct: 604 ALISSSNRD-FDYELLTPKSAFV 625
>07_01_1069 -
9493001-9493176,9493269-9493300,9493405-9493499,
9493623-9493898,9493976-9494039,9498048-9498113,
9498283-9498413,9499722-9499859,9499964-9500079,
9500166-9500331,9500435-9500548,9500609-9500692,
9500995-9501073,9501134-9501337,9501999-9502096,
9502187-9502284,9502359-9502495,9502606-9502824,
9503541-9503743,9503856-9504005
Length = 881
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -3
Query: 409 VERHTPMTLEEYNIEKCDSCVWIYGVFSDWRFDMP--PGFLVCPLIDNVSC-LFGVFEVN 239
+ER + E+ +C V + +F + ++P P FL+C L + +C L+G ++
Sbjct: 464 IERPFTLVDEDSQSRRCTPVVRVESMFEKVKANLPGPPEFLLCVLPERKNCDLYGPWKKK 523
Query: 238 SVDLAFVLT 212
++ ++T
Sbjct: 524 NLHEMGIIT 532
>04_03_0673 -
18562497-18563010,18563080-18563471,18563553-18563649,
18563977-18564149,18564349-18564485,18564806-18564872
Length = 459
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 314 KSPIAEDTI-DPDAAVALFNVIFFQGHWSVPFNATKTVD 427
KS + E + DP A V FN+ F G W + T D
Sbjct: 187 KSDVGEFPVPDPSALVKNFNMADFNGKWYISSGLNPTFD 225
>10_08_0919 +
21564245-21565699,21566876-21567022,21567170-21567286,
21567580-21568176
Length = 771
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 384 WKNITLKSATAASGSMVSSAIGDLICPLV 298
W + L SATAAS S SS+ ++I PL+
Sbjct: 117 WLRLALSSATAASSSS-SSSSDEVISPLL 144
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 26.6 bits (56), Expect = 9.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 224 SEIDTIDFKDTKKAADIINQWANEKTRGHIKSPIAE 331
+E+ + + +KAAD IN+W N H PI E
Sbjct: 739 TELTQTEQRANEKAADFINRWRNLSL--HCPQPITE 772
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,134,804
Number of Sequences: 37544
Number of extensions: 267488
Number of successful extensions: 751
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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