BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_N20 (459 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 57 7e-09 At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 50 1e-06 At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 49 1e-06 At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 45 3e-05 At2g35580.1 68415.m04357 serpin family protein / serine protease... 43 9e-05 At2g14540.1 68415.m01628 serpin family protein / serine protease... 41 5e-04 At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 41 5e-04 At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 39 0.001 At1g64030.1 68414.m07252 serpin family protein / serine protease... 37 0.008 At1g62170.1 68414.m07013 serpin family protein / serine protease... 32 0.16 At2g24930.1 68415.m02981 Ulp1 protease family protein contains P... 31 0.49 At3g30645.1 68416.m03879 hypothetical protein 30 0.86 At2g31650.1 68415.m03864 trithorax 1 (ATX-1) (TRX1) identical to... 30 0.86 At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain... 30 0.86 At4g07452.1 68417.m01144 hypothetical protein 28 2.6 At1g66020.1 68414.m07493 terpene synthase/cyclase family protein... 27 6.1 At3g21750.1 68416.m02744 UDP-glucoronosyl/UDP-glucosyl transfera... 27 8.1 At1g31460.1 68414.m03852 expressed protein 27 8.1 >At2g25240.1 68415.m03020 serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 324 Score = 56.8 bits (131), Expect = 7e-09 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 4/103 (3%) Frame = +2 Query: 146 TMANKMYVGNQYTLNEWFT-ITARQYESEIDTIDFKDT-KKAADIINQWANEKTRGHIKS 319 ++AN +++ ++L F + Y++ +DF + D +N WA T G IK Sbjct: 28 SIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGLIKQ 87 Query: 320 PIAEDTIDP--DAAVALFNVIFFQGHWSVPFNATKTVDKDFHV 442 ++ D+ID + + L N ++F+G WS F+A T DFH+ Sbjct: 88 ILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHL 130 >At3g45220.1 68416.m04880 serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 393 Score = 49.6 bits (113), Expect = 1e-06 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%) Frame = +2 Query: 218 YESEIDTIDFKDTKKAADI--INQWANEKTRGHIKSPIAEDTIDP--DAAVALFNVIFFQ 385 Y + + +DF TK A I +N WA T G IK +++D+I ++ + L N ++F+ Sbjct: 118 YNATCNQVDFA-TKPAEVINEVNAWAEVHTNGLIKEILSDDSIKTIRESMLILANAVYFK 176 Query: 386 GHWSVPFNATKTVDKDFHV 442 G WS F+A T DFH+ Sbjct: 177 GAWSKKFDAKLTKSYDFHL 195 >At2g26390.1 68415.m03167 serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 389 Score = 49.2 bits (112), Expect = 1e-06 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 8/160 (5%) Frame = +2 Query: 2 LLSLYREGAGKQSQEEITNLLGGAKYISPVNKYSSLSRQFSGMNPDFFTMANKMYVGNQY 181 LLSL G+ ++EEI + L + ++ + + + A+ +++ Sbjct: 42 LLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSS 101 Query: 182 TLNEWFT-ITARQYESEIDTIDFKDTK-KAADIINQWANEKTRGHIKSPIAEDTIDP--- 346 L F + Y++ +DF + D +N WA+ T G IK ++ D D Sbjct: 102 YLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKE 161 Query: 347 --DAAVALFNVIFFQGHWSVPFNATKTVDKDFH-VDSKTI 457 ++ + L N ++F+ WS F+A T D DFH +D T+ Sbjct: 162 IRNSTLILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTV 201 >At1g47710.1 68414.m05302 serpin, putative / serine protease inhibitor, putative similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 391 Score = 44.8 bits (101), Expect = 3e-05 Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 4/103 (3%) Frame = +2 Query: 146 TMANKMYVGNQYTLNEWFT-ITARQYESEIDTIDFKDTKKAADII---NQWANEKTRGHI 313 ++AN ++ + F + Y++ + DF+ KA ++I N WA ++T G I Sbjct: 93 SVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQS--KAVEVIAEVNSWAEKETNGLI 150 Query: 314 KSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFHV 442 + E + D + N ++F+G W+ F+ + T + +FH+ Sbjct: 151 TEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHL 193 >At2g35580.1 68415.m04357 serpin family protein / serine protease inhibitor family protein similar to protein zx [Hordeum vulgare subsp. vulgare] GI:19071, serpin [Triticum aestivum] GI:1885350; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 374 Score = 43.2 bits (97), Expect = 9e-05 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 5/102 (4%) Frame = +2 Query: 152 ANKMYVGNQYTLNEWFT-ITARQYESEIDTIDFKDTKKAADI---INQWANEKTRGHIKS 319 AN +++ + F + Y++ + +DF+ KA ++ +N W ++T G I + Sbjct: 95 ANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRT--KADEVNREVNSWVEKQTNGLITN 152 Query: 320 PIAEDTIDPDAAVALF-NVIFFQGHWSVPFNATKTVDKDFHV 442 + + +F N +FF G W F+ + T D DFH+ Sbjct: 153 LLPSNPKSAPLTDHIFANALFFNGRWDSQFDPSLTKDSDFHL 194 >At2g14540.1 68415.m01628 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 [Cucurbita maxima] GI:9937311; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 407 Score = 40.7 bits (91), Expect = 5e-04 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 1/85 (1%) Frame = +2 Query: 191 EWFTITARQYESEIDTIDFKDTKKAADI-INQWANEKTRGHIKSPIAEDTIDPDAAVALF 367 +W + +++ +DF+ + + +N WA+ T IK + ++ Sbjct: 138 DWEDLFLNFFKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYG 197 Query: 368 NVIFFQGHWSVPFNATKTVDKDFHV 442 N ++F+G W F+ + T DK FH+ Sbjct: 198 NALYFKGAWEKAFDKSMTRDKPFHL 222 >At1g63280.1 68414.m07154 serpin-related / serine protease inhibitor-related similar to protein zx [Hordeum vulgare subsp. vulgare] GI:19071, serpin [Triticum aestivum] GI:1885346 Length = 120 Score = 40.7 bits (91), Expect = 5e-04 Identities = 15/55 (27%), Positives = 29/55 (52%) Frame = +2 Query: 275 INQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFH 439 +N+WA++ T G I + ++ + N ++F+G W F+ + T D +FH Sbjct: 16 LNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFH 70 >At1g51330.1 68414.m05772 serpin-related / serine protease inhibitor-related similar to serpin [Hordeum vulgare subsp. vulgare] CAA64599.1 GI:1197577 Length = 193 Score = 39.1 bits (87), Expect = 0.001 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = +2 Query: 275 INQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNATKTVDKDFHV 442 +N WA T G IK+ + ++ N ++F+G W F + T+ K FH+ Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHL 94 >At1g64030.1 68414.m07252 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 [Cucurbita maxima] GI:9937311, serpin [Triticum aestivum] GI:871551; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 385 Score = 36.7 bits (81), Expect = 0.008 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Frame = +2 Query: 239 IDFK-DTKKAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNAT 415 +DF+ + ++ +N W T IK + + ++ N + F+G W PF Sbjct: 126 VDFRSEAEEVRKEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKY 185 Query: 416 KTVDKDFHVDSKT 454 T D DF++ + T Sbjct: 186 YTRDNDFYLVNGT 198 >At1g62170.1 68414.m07013 serpin family protein / serine protease inhibitor family protein similar to phloem serpin-1 GI:9937311 from [Cucurbita maxima]; contains Pfam profile PF00079: Serpin (serine protease inhibitor) Length = 433 Score = 32.3 bits (70), Expect = 0.16 Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 239 IDFKD-TKKAADIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSVPFNAT 415 +DF+ ++ +N WA+ T G IK + ++ + ++F+G W ++ + Sbjct: 190 VDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKS 249 Query: 416 KTVDKDFHV 442 T K F++ Sbjct: 250 MTKCKPFYL 258 >At2g24930.1 68415.m02981 Ulp1 protease family protein contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalytic domain Length = 926 Score = 30.7 bits (66), Expect = 0.49 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +2 Query: 167 VGNQYTLNEW-FTITARQYESEIDTID-FKDTKKAADI-INQWANEKTRGHIKSPIAED 334 +G YT++ F + A YES I + F + A +I + +W +TR I+S IAED Sbjct: 201 IGKTYTVSGLVFVLQAWAYESIITIAERFGNAVNADEIPLLRWGGSRTRSTIESVIAED 259 >At3g30645.1 68416.m03879 hypothetical protein Length = 149 Score = 29.9 bits (64), Expect = 0.86 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +2 Query: 167 VGNQYTLNEW-FTITARQYESEIDTID-FKDTKKAADI-INQWANEKTRGHIKSPIAED 334 +G YT++ F + A Y+S I + F + KA +I + +W TR I+S IAED Sbjct: 90 IGKTYTVSGMAFVLQAWAYDSIITIGERFGNVVKADEIPLLRWGGNSTRAIIESAIAED 148 >At2g31650.1 68415.m03864 trithorax 1 (ATX-1) (TRX1) identical to trithorax-like protein 1 GI:12659210 from [Arabidopsis thaliana]; characterized in Alvarez-Venegas R,et al, ATX-1, an Arabidopsis Homolog of Trithorax, Activates Flower Homeotic Genes.(Curr Biol. 2003 Apr 15;13(8):627-37 PMID: 12699618); contains Pfam profiles PF00856: SET domain, PF00855: PWWP domain, PF00628, PHD-finger; identical to cDNA trithorax-like protein 1 (TRX1) GI:12659209 Length = 1062 Score = 29.9 bits (64), Expect = 0.86 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = -3 Query: 370 IEKCDSCVWIYGVFSDWRFDMPPGFLVCPLI 278 +E CD +W+ + DMPP +CP++ Sbjct: 644 LEPCDGALWLCNLCRPGAPDMPPRCCLCPVV 674 >At1g03050.1 68414.m00277 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to CLATHRIN COAT ASSEMBLY PROTEIN AP180 - Mus musculus, SWISSPROT:Q61548 Length = 599 Score = 29.9 bits (64), Expect = 0.86 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 Query: 375 YSSRVIGVCLSTLPRQLTKISTWTPKL 455 YS I C+STL R+L K WT L Sbjct: 63 YSRSYINACVSTLSRRLNKTKCWTVAL 89 >At4g07452.1 68417.m01144 hypothetical protein Length = 231 Score = 28.3 bits (60), Expect = 2.6 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Frame = +2 Query: 167 VGNQYTLNEW-FTITARQYESEIDTID--FKDTKKAADI-INQWANEKTRGHIKSPIAED 334 +G YT++ F + A Y+S I+TI F + K +I + +W +TR I+S IAED Sbjct: 160 IGKSYTISGMAFVLQAWVYDS-INTIGERFGNVVKEDEISLLRWGCNRTRTIIESAIAED 218 >At1g66020.1 68414.m07493 terpene synthase/cyclase family protein contains Pfam profile: PF01397: Terpene synthase family Length = 598 Score = 27.1 bits (57), Expect = 6.1 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +2 Query: 269 DIINQWANEKTRGHIKSPIAEDTIDPDAAVALFNVIFFQGHWSV 400 D I Q A T H++S A T P +V + NV+ HW++ Sbjct: 208 DYILQEALSFTSSHLESLAACGTCPPHLSVHIQNVLSVPQHWNM 251 >At3g21750.1 68416.m02744 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Length = 473 Score = 26.6 bits (56), Expect = 8.1 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +2 Query: 137 DFFTMANKMYVGNQYTLNEWFTITARQYESEIDTIDFKDTKKAADI 274 +F A Y N L F + + E E+D +FKDT+ D+ Sbjct: 122 EFNLSAYIFYTSNASYLGLQFHVQSLYDEKELDVSEFKDTEMKFDV 167 >At1g31460.1 68414.m03852 expressed protein Length = 301 Score = 26.6 bits (56), Expect = 8.1 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +3 Query: 9 PSTEKEPVNKAKKRSPISW 65 PST+ EP K+K +S SW Sbjct: 183 PSTDSEPEKKSKPKSKSSW 201 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,713,943 Number of Sequences: 28952 Number of extensions: 221614 Number of successful extensions: 670 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 661 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 670 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 762235320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -