Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N19
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   0.55 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   0.95 
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    24   2.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   2.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   5.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.7  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 26.2 bits (55), Expect = 0.55
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 131  EPVRRGAETEGGSRTGQEEQPEGARRRRE 217
            E  RRG+   GG    +EE+ EG+R+R++
Sbjct: 959  EKARRGS---GGDSDSEEEEGEGSRKRKK 984



 Score = 23.4 bits (48), Expect = 3.9
 Identities = 19/104 (18%), Positives = 35/104 (33%)
 Frame = +2

Query: 101  ADQYEGDVEAEPVRRGAETEGGSRTGQEEQPEGARRRRETWHXXXXXXXXXXXXXXXXXX 280
            +++ EG+   +  ++GA   GG +  Q+   EG  ++++                     
Sbjct: 971  SEEEEGEGSRKRKKKGAS--GGQKKRQKAMDEGLSQKQKGRILSKATVSTSESDSDDSRL 1028

Query: 281  XXXXXXXXXXXXXXXXAQKDPPSAPQEEDAQGSQT*GESGQTSG 412
                             ++    A  EED+ GSQ    S   SG
Sbjct: 1029 KIASGDESGGESGAPATKRKRRIASDEEDSDGSQRRSRSRSRSG 1072


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +2

Query: 35   RDPQGPARAQQACC*SDTEIEPADQYEGDVEAEPVRRGAETEGGSRTGQEEQPEG 199
            R+ Q  ARA+            +D  + DVE       A T   +RT  EE   G
Sbjct: 1102 RERQRAARAEMHGAYQPAPSNDSDDDDDDVENRQATNAASTSEAARTAAEESRVG 1156



 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 179 DLFENRLPS-QHRGVRVQLQHRLRIGQRVQF 90
           DL E  L + +HR  + +L+  +++G+R +F
Sbjct: 336 DLQERSLAAAEHRTAKTRLEKAIKVGKRAEF 366


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 42  RKVLRAPNKRVV-RATRKLNPLTNT 113
           ++++  P  R++ RA+  LNPL+NT
Sbjct: 82  KRIIGMPGDRIMTRASFNLNPLSNT 106


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 206 GERPQVVPPDLFENRLPSQHRGVRVQLQHRLRIGQRVQ 93
           GER   VPP L + R   QH+  + Q Q + +  QR Q
Sbjct: 294 GER--YVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQ 329


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 125 EAEPVRRGAETEGGSRTGQEEQPEGARRRRE 217
           EA+ ++   +TEGG   G+ EQ      ++E
Sbjct: 280 EAKELQERIDTEGGGVLGELEQQLAVESKKE 310


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 2    QHRPQPSAEVRRDPQGPARAQ 64
            QH+P    E R   QGP+  Q
Sbjct: 981  QHKPSTILEFRPKHQGPSEVQ 1001


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,060
Number of Sequences: 2352
Number of extensions: 4352
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)