Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N17
(517 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 157 1e-39
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 144 7e-36
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 120 2e-28
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 114 6e-27
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 111 6e-26
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 101 8e-23
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 64 1e-11
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 31 0.10
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 29 0.55
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 0.72
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 27 2.2
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 26 2.9
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 26 2.9
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 25 6.7
SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr... 25 6.7
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 8.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 8.9
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 157 bits (380), Expect = 1e-39
Identities = 70/164 (42%), Positives = 105/164 (64%)
Frame = +2
Query: 2 GDPLHRGTAHGPQNHNAHMDKLIEYCEVGVKEGAKLLYGGKRVDRKGFFFQPTVFTDVTD 181
GDP T G Q ++++ Y E G+ GAKL GGKR G+F +PT+ ++VT+
Sbjct: 334 GDPFAEDTFQGAQVSKQQYERIVSYIESGIAHGAKLEIGGKRHGNLGYFVEPTILSNVTE 393
Query: 182 DMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAG 361
DM + KEE FGP++ + KF + +E+ IRR NN+ YGLA+GV T +++ A++ + ++AG
Sbjct: 394 DMAVGKEEIFGPVLAVIKF--KTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNALEAG 451
Query: 362 TVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 493
TV+VN YN PFGG+K+SG G++LG L Y +TK V +
Sbjct: 452 TVWVNCYNLLHHQIPFGGYKESGIGRELGSYGLTNYTQTKAVHI 495
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 144 bits (349), Expect = 7e-36
Identities = 68/167 (40%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Frame = +2
Query: 2 GDPLHRGTAHGPQNHNAHMDKLIEYCEVGVKEGAKLLYGGKRVDRK-GFFFQPTVFTDVT 178
G P T GP + +++ Y E G KEGAKL+ G + + K G+F PT+F D +
Sbjct: 328 GMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCS 387
Query: 179 DDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDA 358
++M I KEE FGP++ ISKF + ++ I +ANNT YGLA+ FT+D+ RA + ++ ++A
Sbjct: 388 ENMTIVKEEIFGPVVAISKFKTE--DEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEA 445
Query: 359 GTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVEY 499
G VF+N+ +D+ APFGG K SG G +LG + Y + K V + +
Sbjct: 446 GMVFINSTENSDIQAPFGGIKMSGIGNELGSNGIEMYTQIKAVHINF 492
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 120 bits (288), Expect = 2e-28
Identities = 62/166 (37%), Positives = 96/166 (57%), Gaps = 1/166 (0%)
Frame = +2
Query: 2 GDPLHRGTAHGPQNHNAHMDKLIEYCEVGVKEGAKLLYGGKRVDR-KGFFFQPTVFTDVT 178
GD +A GP K+ ++ E V +GAK+ GGK + KG+FF+PTV + VT
Sbjct: 328 GDGFDSSSAVGPLISQDGCKKVSKHIEDAVSKGAKITVGGKEISSSKGYFFEPTVLSGVT 387
Query: 179 DDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDA 358
DM +A EE+FGP+ + KF + E+VI AN+++ GLA VFT ++S + A+ ++
Sbjct: 388 QDMLVASEETFGPLASVFKFD--DTEEVIEWANDSDVGLAGYVFTNNLSTMIHVAKELEV 445
Query: 359 GTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVE 496
G V N + FGG KQSGFGK+ G+ + E++ K + ++
Sbjct: 446 GLVGANIEMVDEPFISFGGIKQSGFGKEAGRLGVQEFMVVKEINLK 491
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 114 bits (275), Expect = 6e-27
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 GDPLHRGTAHGPQNHNAHMDKLIEYCEVGVKEGAKLLYGGKRVDRKG-FFFQPTVFTDVT 178
G L G HGP + K+ ++ E V++G ++ GGK G +F+PTV +
Sbjct: 333 GYGLDAGVTHGPLISEKAISKVKQHVEDAVQKGGVVVTGGKVASNLGPMYFEPTVIINAK 392
Query: 179 DDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDA 358
M I++EE+FGP+ + KF + ++V+ AN++ GLA +F++D+SR + E +
Sbjct: 393 QGMLISEEETFGPVGALFKFDTE--DEVVAWANDSPVGLAGYLFSKDISRVFRVGEALQV 450
Query: 359 GTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTV 493
G V NT +DV +PFGG K+SGFG++ + ++EYL K++T+
Sbjct: 451 GMVGCNTGLVSDVLSPFGGVKESGFGREGSKYGISEYLDIKSLTI 495
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 111 bits (267), Expect = 6e-26
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 GDPLHRGTAHGPQNHNAHMDKLIEYCEVGVKEGAKLLYGG-KRVDRKGFFFQPTVFTDVT 178
G+ L GP +K++ Y + + EG K + GG R ++KG+F PTVFT+V
Sbjct: 335 GNGLDPQVTLGPVVSKTQFEKIVSYIQSAINEGCKCVVGGLPRSEQKGYFIPPTVFTNVQ 394
Query: 179 DDMYIAKEESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDA 358
I +EE FGP++ + F + E+ + AN++EYGL SGVF+ + F+ I+A
Sbjct: 395 THNKIWREEIFGPVLAVKTFHTN--EEALELANDSEYGLGSGVFSTNPKTLEFFSNNIEA 452
Query: 359 GTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVT 490
G +N Y+ P+ G+K SG G L + NEY++ K +T
Sbjct: 453 GMCSLNNYHVVTHELPWIGWKHSGLGVGLSKHGYNEYMRLKQIT 496
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 101 bits (241), Expect = 8e-23
Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Frame = +2
Query: 32 GPQNHNAHMDKLIEYCEVGVKEGAKLLYGGKRVDR----KGFFFQPTVFTDVTDDMYIAK 199
G N D L + V +GA+L+YGG R KG +F PT+ D T++M IA+
Sbjct: 313 GAMVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFLPTLLVDATNEMKIAQ 372
Query: 200 EESFGPIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNT 379
EE F PI ++ F +++ E + AN TE+GL + VF RD F + ++ G V VN
Sbjct: 373 EECFAPIALV--FRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVND 430
Query: 380 YNKTD-VAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVE 496
+ + PFGG K+SG+G+ G E L +K + +
Sbjct: 431 FGAFYLLQMPFGGCKKSGYGRFAGYEGLRGICNSKAIAYD 470
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 64.1 bits (149), Expect = 1e-11
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Frame = +2
Query: 32 GPQNHNAHMDKLIEYCEVGVKEGA-KLLYGGKRVDRKGFFFQPTVFTDVTDDMYIAKEES 208
GP H A +KL + E + ++L GGK D +GFF +PTV I E
Sbjct: 374 GPVIHQASFNKLKKVLESAASDSEIEVLAGGKADDSEGFFVEPTVLLSKNPKHDIFVNEL 433
Query: 209 FGPIMIISKFSSRNMEDVIRRAN-NTEYGLASGVFTRD--VSRALQFAERIDAGTVFVNT 379
FGP++ + + N++ V + T YGL +F +D V R L R AG ++N
Sbjct: 434 FGPVLSVYVYEDDNLDAVCDLIDTTTPYGLTGSIFAQDRVVVRKLTDRLRNAAGNFYIND 493
Query: 380 YNKTDVAA--PFGGFKQSGFGKDLG 448
V PFGG + SG G
Sbjct: 494 KCTGAVVGEQPFGGARASGTNDKAG 518
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 31.1 bits (67), Expect = 0.10
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 215 PIMIISKFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTD 394
P+ I + SS +++ I NT+ GL+S D S+ F D T+F +Y+KT+
Sbjct: 651 PVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLF--SYSKTE 708
Query: 395 VAAPF 409
+
Sbjct: 709 TCLTY 713
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.7 bits (61), Expect = 0.55
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 375 LTNTVPASMRSANCSARDTSRVNTPLARPYSVLFAR 268
+T +P+S S+N S +DT+ VN+P A +S F +
Sbjct: 1 MTFRIPSSQESSNKSEKDTT-VNSPNASSFSSFFKK 35
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 28.3 bits (60), Expect = 0.72
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 384 LYVLTNTVPASMRSA-NCSARDTSRVNTPLARPYSVLFARRITSSMF 247
LYV + S+ S+ C+A S+ N RPYSV+ +R S F
Sbjct: 936 LYVYKSDATNSLASSIRCTADKISKSNFDFRRPYSVIPSRMTGRSSF 982
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 223 HDRSERFLLSDVHVVGDVSEHSWLEEEPLAVDAFP 119
HDRSER GD S H +EPL V P
Sbjct: 43 HDRSER---PSSREAGDRSRHERFSKEPLEVKKLP 74
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.2 bits (55), Expect = 2.9
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 257 DVIRRANNTEYGLASGV 307
D+I+R +TEYG+A+G+
Sbjct: 239 DIIQRKGSTEYGVAAGL 255
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 171 SVNTVGWKKNPLRSTRFPPYSNLAPSFTPTS 79
S ++ G+ +P P YS +PS++PTS
Sbjct: 1559 SPSSPGYSTSPAYMPSSPSYSPTSPSYSPTS 1589
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -2
Query: 213 PNDSSLAMYMSSVTSVNTVGWKKNPLRSTRFPPYSNLAPSFTPTS 79
P S+ YM S S + +P S P YS +PS++PTS
Sbjct: 1563 PGYSTSPAYMPSSPSYSPT----SPSYSPTSPSYSPTSPSYSPTS 1603
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 144 NPLRSTRFPPYSNLAPSFTPTS 79
+P S P YS +PS++PTS
Sbjct: 1603 SPSYSATSPSYSPTSPSYSPTS 1624
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.0 bits (52), Expect = 6.7
Identities = 26/101 (25%), Positives = 38/101 (37%)
Frame = -2
Query: 384 LYVLTNTVPASMRSANCSARDTSRVNTPLARPYSVLFARRITSSMFXXXXXXXXXIGPND 205
++ LTNT+ AS + S TP + PY A T S+ D
Sbjct: 98 VFELTNTLAASPAPPSLSEPSYVMARTPSSSPYPHDRAEVGTKSLSAQFGGMSLGA---D 154
Query: 204 SSLAMYMSSVTSVNTVGWKKNPLRSTRFPPYSNLAPSFTPT 82
+ AM + + SV+ T PP NL S++ T
Sbjct: 155 GAAAMPTNELVSVDLYNQTPEISDLTSPPPPINLPLSYSAT 195
>SPBC21.02 |||TLDc domain protein 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 511
Score = 25.0 bits (52), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 247 PAAKFADNHDRSERFLLSDVHVVG 176
PA + +N + ERFL+ D+ V+G
Sbjct: 475 PATNY-ENFEYEERFLIQDLEVIG 497
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 481 FCFEILVQSFLAEIFPEAGLLEAAE 407
+C + L Q F+ EIF E G+ + +E
Sbjct: 1732 YCMDSLAQIFVDEIFGEVGVEKDSE 1756
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 24.6 bits (51), Expect = 8.9
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Frame = -2
Query: 378 VLTNTVPASMRSANCSARDTS----RVNTPLARPYSVLFARRITSSMFXXXXXXXXXIGP 211
V T+T S N S TS +TP+ + + ITSS
Sbjct: 486 VNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSV 545
Query: 210 NDSSLAMYMSSVTSVNTVGWKKNPLRSTRFPPYSNLAPSFTPTSQYSI 67
+SS + S+V + +T + L S+ S + + TP ++YS+
Sbjct: 546 LNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITRYSV 593
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,733,674
Number of Sequences: 5004
Number of extensions: 30830
Number of successful extensions: 164
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -