Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N16
(346 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21892| Best HMM Match : Hexapep (HMM E-Value=3.8e-05) 32 0.14
SB_997| Best HMM Match : Hexapep (HMM E-Value=6.8e-15) 30 0.58
SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 30 0.58
SB_41321| Best HMM Match : Hexapep (HMM E-Value=0.01) 29 1.0
SB_38050| Best HMM Match : Hexapep (HMM E-Value=0.04) 29 1.3
SB_34483| Best HMM Match : Hexapep (HMM E-Value=0.0027) 29 1.3
SB_6145| Best HMM Match : Hexapep (HMM E-Value=2.2) 28 2.3
SB_5651| Best HMM Match : Hexapep (HMM E-Value=0.00035) 27 3.1
SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_23181| Best HMM Match : Hexapep (HMM E-Value=4.5e-09) 27 4.1
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_35171| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_34532| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_18782| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_54110| Best HMM Match : Hexapep (HMM E-Value=9.8e-14) 26 7.1
SB_33955| Best HMM Match : SDA1 (HMM E-Value=0.79) 26 7.1
SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9) 26 7.1
SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.1
SB_2537| Best HMM Match : zf-C2HC5 (HMM E-Value=2.5e-28) 26 7.1
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.4
SB_35319| Best HMM Match : Hexapep (HMM E-Value=0.35) 26 9.4
SB_30913| Best HMM Match : Hexapep (HMM E-Value=4.6e-18) 26 9.4
>SB_21892| Best HMM Match : Hexapep (HMM E-Value=3.8e-05)
Length = 462
Score = 31.9 bits (69), Expect = 0.14
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 93 ESGGNPNEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALEKA 257
E G + V VVDGD + V+++DGD ++ VD G T D + +G+T L+ A
Sbjct: 176 EDVGTLDSVDVVDGDPLLDDVDVVDGDTLLDDVDDVDGVTLLDDVDVV-DGVTLLDDA 232
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGDNQVNIIDGD---NQVNIVDG 188
D G+P ++V VVD D V+++DGD + V++VDG
Sbjct: 46 DVVDGDPLLDDVDVVDDD--VDVVDGDPLLDDVDVVDG 81
>SB_997| Best HMM Match : Hexapep (HMM E-Value=6.8e-15)
Length = 916
Score = 29.9 bits (64), Expect = 0.58
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
+EV VVDGD + V+++DGD ++ VD G T D
Sbjct: 443 DEVDVVDGDPLLDDVDVVDGDTLLDDVDVVDGDTLLD 479
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALE 251
+ V VVDGD + V+++DGD ++ VD G T D + +G+T L+
Sbjct: 636 DSVDVVDGDPLLDDVDVVDGDTLLDDVDDVDGNTLLDDVDVV-DGVTLLD 684
Score = 25.8 bits (54), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
D G+P ++V VVDG + V+++DGD ++ VD G T D
Sbjct: 98 DVVDGDPLLDDVDVVDGVTLLDDVDVVDGDTLLDDVDVVDGATLLD 143
>SB_23964| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1482
Score = 29.9 bits (64), Expect = 0.58
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 93 ESGGNPNEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALEKA 257
E G + V VVDGD + V+++DGD ++ VD G T D + +G+T L+ A
Sbjct: 276 EDVGLLDSVDVVDGDPLLDDVDVVDGDTLLDDVDVVDGNTLLDDVDVV-DGVTLLDDA 332
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDGD + V+++DGD ++ VD G T D
Sbjct: 113 DDVDVVDGDTLLDDVDVVDGDKLLDDVDVVDGDTLLD 149
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
+++ VVDGD + +++DGD ++ VD G T D
Sbjct: 826 DDINVVDGDTLLDDADVVDGDTLLDDVDDVDGDTLLD 862
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 108 PNEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
P++V VVDG + V+++DGD ++ VD G T D
Sbjct: 933 PDDVDVVDGVTLLDDVDVVDGDTLLDDVDVVDGVTLLD 970
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
D G+P ++V VVDG + V+++DGD ++ VD G T D
Sbjct: 726 DVVDGDPLLDDVDVVDGATLLDDVDVVDGDTLLDDVDVVDGATLLD 771
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
D G+P ++V VVDG + V+++DGD ++ VD G T D
Sbjct: 1367 DVVDGDPLLDDVDVVDGATLLDDVDVVDGDTLLDDVDVVDGATLLD 1412
>SB_41321| Best HMM Match : Hexapep (HMM E-Value=0.01)
Length = 1171
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
D G+P ++V VVDGD + V ++DGD ++ VD G T D
Sbjct: 437 DVVDGDPLLDDVDVVDGDTLLDDVEVVDGDTLLDDVDVVDGATLLD 482
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDGD + V+++DGD ++ VD G T D
Sbjct: 684 DDVDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 720
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDGD + V+++DGD ++ VD G T D
Sbjct: 744 DDVDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 780
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDGD + V+++DGD ++ VD G T D
Sbjct: 756 DDVDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 792
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDGD + V+++DGD ++ VD G T D
Sbjct: 768 DDVDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 804
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDGD + V+++DGD ++ VD G T D
Sbjct: 780 DDVDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 816
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
+++ VVDGD + V+++DGD ++ VD G T D
Sbjct: 672 DDIDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 708
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +3
Query: 114 EVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
+V VVDGD + V+++DGD ++ VD G T D
Sbjct: 733 DVDVVDGDTLLDDVDVVDGDTLLDDVDVVDGDTLLD 768
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPT 203
++V VVDGD + V+++DGD ++ VD G T
Sbjct: 840 DDVDVVDGDTLLDDVDVVDGDKLLDDVDVVDGDT 873
>SB_38050| Best HMM Match : Hexapep (HMM E-Value=0.04)
Length = 324
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALE 251
D G+P ++V VVDG + VN++DGD ++ VD G T D + +G+T LE
Sbjct: 143 DVVDGDPLLDDVDVVDGVTLLDDVNVVDGDPLLDDVDVVDGATLLDDVDVV-DGVTLLE 200
Score = 26.6 bits (56), Expect = 5.4
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALE 251
D G+P ++V VVDG + V+++DGD ++ VD G T D + +G+T L+
Sbjct: 47 DVVDGDPLLDDVDVVDGATLLDDVDVVDGDTLLDDVDVVDGDTLLDDVDVV-DGVTLLD 104
>SB_34483| Best HMM Match : Hexapep (HMM E-Value=0.0027)
Length = 323
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALE 251
D G+P ++V VVDG + VN++DGD ++ VD G T D + +G+T LE
Sbjct: 142 DVVDGDPLLDDVDVVDGVTLLDDVNVVDGDPLLDDVDVVDGATLLDDVDVV-DGVTLLE 199
>SB_6145| Best HMM Match : Hexapep (HMM E-Value=2.2)
Length = 261
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPT 203
N+V VVDGD + V+++D D + VD G T
Sbjct: 171 NDVDVVDGDTLLDDVDVVDSDKLLEYVDVVDGVT 204
>SB_5651| Best HMM Match : Hexapep (HMM E-Value=0.00035)
Length = 873
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVD D + +++DGD ++ VDG G T D
Sbjct: 267 DDVDVVDEDTLLDDADVVDGDKLLDDVDGVDGDTLLD 303
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +3
Query: 93 ESGGNPNEVQVVDGD---NQVNIIDGDNQVNIVD 185
E G +V VVDGD + ++++DGD ++ VD
Sbjct: 453 EDVGLLEDVDVVDGDKLLDDIDVVDGDTLLDDVD 486
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +3
Query: 93 ESGGNPNEVQVVDGD---NQVNIIDGD---NQVNIVDG 188
E G +V VVDGD + ++++DGD + ++VDG
Sbjct: 177 EDVGLLEDVDVVDGDKLLDDIDVVDGDTLLDDADVVDG 214
>SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 102 GNPNEVQVVDGDNQVNIIDGDNQVNIVD 185
G+ + V DGD+ VN D D+ VN+VD
Sbjct: 239 GDDDAVDDDDGDDVVNDDDDDDVVNVVD 266
>SB_23181| Best HMM Match : Hexapep (HMM E-Value=4.5e-09)
Length = 782
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +3
Query: 93 ESGGNPNEVQVVDGD---NQVNIIDGDNQVNIVD 185
E G ++V VVDGD + V+++DGD ++ VD
Sbjct: 95 EDVGLLDDVDVVDGDTLLDDVDVVDGDTLLDDVD 128
Score = 26.2 bits (55), Expect = 7.1
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALE 251
D G+P ++V VVDG + V+++DGD ++ VD G T D + +G+T L+
Sbjct: 308 DVVDGDPLLDDVDVVDGVTLLDDVDVVDGDTLLDDVDVVDGDTLLDDVDVV-DGVTLLD 365
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 84 PQDESGGNPNEVQVVDGDNQVNIIDGDNQVNIVDGPS 194
PQD S G+PN +++ N + +D Q + DG S
Sbjct: 2018 PQDRSDGDPNSQSILEA-NLIEDLDSFGQRDRCDGTS 2053
>SB_35171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.1 bits (57), Expect = 4.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 90 DESGGNPNEVQVVDGDNQVNIIDGDN 167
DE G+ ++ + DGDN+ + DGDN
Sbjct: 57 DEEDGDDDDTEDGDGDNEDDDKDGDN 82
>SB_34532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 102 GNPNEVQVVDGDNQVNIIDGDNQVNIVDGPSGPTPRDG 215
G+P+ V + +GD V + +GD V + +G T DG
Sbjct: 22 GDPS-VTICEGDPSVTMCEGDPSVTMCEGDPSVTMCDG 58
>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +3
Query: 114 EVQVVDGDNQVNIIDGDNQVNIVDGPSGPTP----RDGSLLK*NGITALEKA 257
EV + +GD V++ +GD V++ +G TP +G+L N IT E A
Sbjct: 218 EVHLKEGDGVVHLREGDGVVHLREGDGVETPTNKINEGTL---NDITTKETA 266
>SB_18782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 93 ESGGNPNEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
E G +V VVDGD + V+++D D ++ VD G T D
Sbjct: 25 EDVGLLEDVDVVDGDTLLDDVDVVDSDTLLDDVDVVDGDTLLD 67
>SB_54110| Best HMM Match : Hexapep (HMM E-Value=9.8e-14)
Length = 729
Score = 26.2 bits (55), Expect = 7.1
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALE 251
D G+P ++V VVDG + V+++DGD ++ VD G T D + +G+T L+
Sbjct: 238 DVVDGDPLLDDVNVVDGVTLLDDVDVVDGDTLLDDVDVVDGDTLLDDVDVV-DGVTLLD 295
>SB_33955| Best HMM Match : SDA1 (HMM E-Value=0.79)
Length = 258
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +3
Query: 87 QDESGGNPNEVQVVDGDNQVNIIDGDNQVNIVDGPSGPTPRDGSLLK*NGITALEKALFY 266
+D++G + DGD + DG N ++ D DG +G+ A + F
Sbjct: 80 KDDNGDDDVVDDDGDGDKDTGVFDGANDNDVEDDDDDEEEEDGDNDDNDGVDAFVELEFT 139
Query: 267 N 269
N
Sbjct: 140 N 140
>SB_24734| Best HMM Match : Hexapep (HMM E-Value=2.9)
Length = 459
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
D G+P ++V VVDG + V+++DGD ++ VD G T D
Sbjct: 128 DVVDGDPLLDDVDVVDGATLLDDVDVVDGDTLLDDVDVVDGDTLLD 173
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDG + V+++DGD V+ VD G T D
Sbjct: 197 DDVDVVDGVTLLDDVDVVDGDQLVDDVDVVDGVTLLD 233
>SB_41711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1662
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 90 DESGGNPNEVQVVDGDNQVNIIDGDNQVN 176
D++G N ++ + D DN +N D DN +N
Sbjct: 1406 DDNGINDDDNDINDDDNDIN--DDDNDIN 1432
>SB_2537| Best HMM Match : zf-C2HC5 (HMM E-Value=2.5e-28)
Length = 523
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 23 HG*AYDCTGIGRIVCARSG 79
HG +CT GRIVC + G
Sbjct: 140 HGLVNNCTSCGRIVCDQEG 158
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 37 RLYWHWSHCLRSQRLDLKTSPVVTLMKFKLSMEII 141
RLYW + HC + Q ++ L+ +KL+ + +
Sbjct: 607 RLYWGYIHCKKGQ---VRADEAFLLISYKLAKDFV 638
>SB_35319| Best HMM Match : Hexapep (HMM E-Value=0.35)
Length = 254
Score = 25.8 bits (54), Expect = 9.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 90 DESGGNP--NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
D G+P ++V VVDG + V+++DGD ++ VD G T D
Sbjct: 178 DVVDGDPLLDDVDVVDGVTLLDDVDVVDGDTLLDDVDVVDGDTLLD 223
>SB_30913| Best HMM Match : Hexapep (HMM E-Value=4.6e-18)
Length = 856
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 111 NEVQVVDGD---NQVNIIDGDNQVNIVDGPSGPTPRD 212
++V VVDG + V+++DGD V+ VD G T D
Sbjct: 803 DDVDVVDGVTLLDDVDVVDGDQLVDDVDVVDGVTLLD 839
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,155,489
Number of Sequences: 59808
Number of extensions: 143815
Number of successful extensions: 611
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 510674393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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