Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N14
(276 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-19
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 27 2.3
SB_45263| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0026) 27 3.1
SB_50401| Best HMM Match : Pkinase (HMM E-Value=1.7e-16) 26 5.4
SB_12990| Best HMM Match : PSI (HMM E-Value=6) 26 5.4
SB_50410| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_46447| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0) 25 9.5
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 89.0 bits (211), Expect = 5e-19
Identities = 41/63 (65%), Positives = 45/63 (71%)
Frame = +2
Query: 86 NCEVFFEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 265
N V F EKF D SWE WV S G + GKFK TAGKFY DAEADKG+QTSEDA+FY +
Sbjct: 753 NPVVHFLEKFEDKSWEDRWVSSTSKGAQQGKFKWTAGKFYGDAEADKGIQTSEDAKFYGI 812
Query: 266 SRK 274
S K
Sbjct: 813 SAK 815
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 224 YPPLRHCRTFQQSI*TCRILFRGVHYIPNL 135
+P LRHC+T+Q ++ +L G+ + NL
Sbjct: 503 FPGLRHCKTYQSAL----LLLHGIPVVYNL 528
>SB_45263| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0026)
Length = 123
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 92 EVFFEEKFSD--DSWE-SNWVYSEHPGKEFGKFKLTAGK 199
E FF E+ S+ D W W+ SE P K+ G + G+
Sbjct: 82 EDFFMERVSNYRDGWGIEKWMVSEQPHKDTGTIDFSTGQ 120
>SB_50401| Best HMM Match : Pkinase (HMM E-Value=1.7e-16)
Length = 535
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 180 NLPNSFPGCSLYTQFDSHESSENFSSKNTSQ 88
NL N C++ +S S++N SSKNT +
Sbjct: 448 NLTNDHDYCAMCKISNSKNSTQNSSSKNTDK 478
>SB_12990| Best HMM Match : PSI (HMM E-Value=6)
Length = 270
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 180 NLPNSFPGCSLYTQFDSHESSENFSSKNTSQ 88
NL N C++ +S S++N SSKNT +
Sbjct: 183 NLTNDHDYCAMCKISNSKNSTQNSSSKNTDK 213
>SB_50410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 98 FFEEKFSD--DSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADK-GLQTSE 244
FF++ S+ D++ +W +H +EFG + T K Y+ DK GLQ+ +
Sbjct: 518 FFKQLKSECNDTFTKHWNCLDHNNQEFGYCRKTQ-KQYDACVLDKLGLQSQQ 568
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +2
Query: 86 NCEVFFEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFY 259
+C F+E+F D + E + S F T G FY D D G S+D Y
Sbjct: 426 SCLNHFKERFPDQA-EGSAARSLERDIRAAAFAETQGIFYGDDGGDCGDDKSDDGDDY 482
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 7 KDGACCELKNEICSAGYC 60
KDG CE KNE G C
Sbjct: 207 KDGVSCEDKNECSDPGVC 224
>SB_15121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 179 TCRILFRGVHYIPNLIPMNRLRIFPQRTL 93
T R + R V Y+P L+P+ R+ IF TL
Sbjct: 241 TLRPVMRIVIYLPTLLPVMRIVIFYLPTL 269
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 173 RILFRGVHYIPNLIPMNRLRIFPQRTLHNLL 81
R + R V Y+P L+P+ R+ IF TL ++
Sbjct: 284 RPVMRIVIYLPTLLPVMRIAIFYLPTLRPVM 314
>SB_46447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 229 TFIRLCVIVELSSSQFELAE--FFSGVFTIY 143
TF++ C++V +S ++ AE F GV+ +
Sbjct: 164 TFVQFCLVVLISGGFYKAAEGPFLEGVYAYF 194
>SB_5722| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1236
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = -3
Query: 229 TFIRLCVI---VELSSSQFELAEFFSGVFTIY 143
TFI LC++ + ++ FE+ FSG+ I+
Sbjct: 13 TFITLCILFNTLAMALEHFEMDSTFSGILDIF 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,392,568
Number of Sequences: 59808
Number of extensions: 154824
Number of successful extensions: 368
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 16,821,457
effective HSP length: 68
effective length of database: 12,754,513
effective search space used: 293353799
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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