Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N14
(276 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 62 7e-11
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 61 9e-11
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 53 3e-08
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 53 3e-08
At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing p... 29 0.44
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 28 0.77
At5g04710.1 68418.m00480 aspartyl aminopeptidase, putative simil... 27 1.8
At2g07280.1 68415.m00835 hypothetical protein 27 2.3
At1g75420.1 68414.m08761 glycosyl transferase family 1 protein c... 27 2.3
At2g47960.1 68415.m05999 expressed protein 26 4.1
At1g63820.1 68414.m07222 hypothetical protein 26 4.1
At4g17350.1 68417.m02602 expressed protein 25 5.4
At4g01740.1 68417.m00226 DC1 domain-containing protein similar t... 25 5.4
At5g36170.2 68418.m04359 peptide chain release factor, putative ... 25 9.4
At2g37840.2 68415.m04646 protein kinase family protein contains ... 25 9.4
At2g37840.1 68415.m04645 protein kinase family protein contains ... 25 9.4
At1g58210.1 68414.m06610 kinase interacting family protein simil... 25 9.4
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 61.7 bits (143), Expect = 7e-11
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +2
Query: 86 NCEVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFY 259
+ EV FEEKF +D WE WV S+ + G++K TAG + DA DKG+QTSED RFY
Sbjct: 21 SAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDAN-DKGIQTSEDYRFY 78
Query: 260 ALS 268
A+S
Sbjct: 79 AIS 81
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 61.3 bits (142), Expect = 9e-11
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +2
Query: 95 VFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYALS 268
V FEE+F DD WE+ WV SE + G++K TAG + DA DKG+QTSED RFYA+S
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDAN-DKGIQTSEDYRFYAIS 81
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 52.8 bits (121), Expect = 3e-08
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +2
Query: 92 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 265
E+F EE F + W+S WV S+ E G FK TAGK+ D + +KG+QT DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPD-NKGIQTYNDAKHYAI 86
Query: 266 SRK 274
S K
Sbjct: 87 SAK 89
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 52.8 bits (121), Expect = 3e-08
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +2
Query: 92 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 265
E+F EE F + W+S WV S+ E G FK TAGK+ D + +KG+QT DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPD-NKGIQTYNDAKHYAI 86
Query: 266 SRK 274
S K
Sbjct: 87 SAK 89
>At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing
protein / plus-3 domain-containing protein / GYF
domain-containing protein similar to CPRF interacting
protein [Petroselinum crispum] GI:9588690; contains Pfam
profiles PF02201: BAF60b domain of the SWIB complex,
PF03126: Plus-3 domain, PF02213: GYF domain; contains
non-conensus AT-AC splice sites at intron 5
Length = 553
Score = 29.1 bits (62), Expect = 0.44
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 116 SDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAE 217
S D + NW+Y + G G F LT K ++DAE
Sbjct: 492 SYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAE 525
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 28.3 bits (60), Expect = 0.77
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -1
Query: 201 NFPAVNLNLPNSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIASTADFIF*FT 22
N+P + + + CS D SS NF D++ N L I D I F
Sbjct: 31 NYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIASDDLVNYLLITENIDTIMHFA 90
Query: 21 AST 13
A T
Sbjct: 91 AQT 93
>At5g04710.1 68418.m00480 aspartyl aminopeptidase, putative similar
to SP|Q9ULA0 Aspartyl aminopeptidase (EC 3.4.11.21)
{Homo sapiens}; contains Pfam profile PF02127:
Aminopeptidase I zinc metalloprotease (M18)
Length = 526
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 180 NLPNSFPGCSLYTQFDSHESSENFSSKNTSQFI 82
NL +SF C+L DS ESSEN S+++ + I
Sbjct: 311 NLASSF--CALRALIDSCESSENLSTEHDIRMI 341
>At2g07280.1 68415.m00835 hypothetical protein
Length = 401
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 98 FFEEKFSDDSWESNWVYSEHP 160
F E F D+ E +W + EHP
Sbjct: 210 FLRELFGKDTGEQDWTHFEHP 230
>At1g75420.1 68414.m08761 glycosyl transferase family 1 protein
contains Pfam glycosyl transferase, group 1 family
protein domain PF00534
Length = 463
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -1
Query: 171 NSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAI 55
+SF CS+ +QF ++ E+ ++K S +D + +KL +
Sbjct: 32 SSFETCSISSQFVEEKNGESSAAKFQSNPLDFMKSKLVL 70
>At2g47960.1 68415.m05999 expressed protein
Length = 442
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 152 EHPGKEFGKFKLTAGKFYNDAEADK 226
EH KE G L YNDA+ ++
Sbjct: 159 EHDVKELGAHTLVCSALYNDADGER 183
>At1g63820.1 68414.m07222 hypothetical protein
Length = 265
Score = 25.8 bits (54), Expect = 4.1
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 225 LSASASL*NFPAVNLNLPNSFPGCSLYTQFDSHESSE-NFSSKNTSQFIDEIAN 67
LS+S + + L NSFP S + FD+ ++ + F+S + F+++ +N
Sbjct: 67 LSSSPPISQLQTLTLTHTNSFPNFSGFENFDTVKTEQLLFNSPFDAPFMEDSSN 120
>At4g17350.1 68417.m02602 expressed protein
Length = 405
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 101 FEEKFSDDSWESNWVYS-EHPGKEF 172
FE FSD W +N+ Y E P F
Sbjct: 256 FERSFSDSHWHANFQYRLEEPNLPF 280
>At4g01740.1 68417.m00226 DC1 domain-containing protein similar to
T15B16.6 similar to A. thaliana CHP-rich hypothetical
proteins encoded by T10M13, GenBank accession number
AF001308
Length = 652
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 13 GACCELKNEICSAGYCQFIGNFVNK 87
G CC IC YC+ FV+K
Sbjct: 25 GDCCGRFESICDGYYCKICDIFVHK 49
>At5g36170.2 68418.m04359 peptide chain release factor, putative
similar to SP|P28367 Peptide chain release factor 2
(RF-2) {Bacillus subtilis}; contains Pfam profiles
PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF
domain
Length = 455
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
Frame = -1
Query: 201 NFPAVNLNLPNSFPGCSLYTQFDS-----HESSENFSSKN-TSQFI 82
N P + L+LP S P S ++F+S ES+ + S++N TS+++
Sbjct: 31 NLPLLRLSLPLSLPNFSSSSRFNSPIFAAQESNLSVSNENETSEWL 76
>At2g37840.2 68415.m04646 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 596
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 132 SHESSENFSSKNTSQFIDEI 73
SH+ SE SS+ QFI EI
Sbjct: 456 SHDGSEEISSQIQRQFIQEI 475
>At2g37840.1 68415.m04645 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 733
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 132 SHESSENFSSKNTSQFIDEI 73
SH+ SE SS+ QFI EI
Sbjct: 593 SHDGSEEISSQIQRQFIQEI 612
>At1g58210.1 68414.m06610 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) {Petunia
integrifolia}
Length = 1246
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 209 DAEADKGLQTSEDARFYALSRK 274
+AE +KG T+ RFYAL K
Sbjct: 583 EAEIEKGRITTAKERFYALRNK 604
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,899,947
Number of Sequences: 28952
Number of extensions: 106988
Number of successful extensions: 348
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 12,070,560
effective HSP length: 69
effective length of database: 10,072,872
effective search space used: 221603184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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