Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N12
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058641-1|AAL13870.1|  663|Drosophila melanogaster LD34105p pro...   182   2e-46
AE014134-611|AAF51102.1|  663|Drosophila melanogaster CG3238-PA ...   182   2e-46
BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p pro...    28   7.8  
AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein...    28   7.8  
AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA...    28   7.8  

>AY058641-1|AAL13870.1|  663|Drosophila melanogaster LD34105p
           protein.
          Length = 663

 Score =  182 bits (444), Expect = 2e-46
 Identities = 81/122 (66%), Positives = 102/122 (83%)
 Frame = -3

Query: 565 PVVRFKNKKEFTARTERWFVKNANGTLLCRRQVPLNLAWAFSIHKSQGLTLDCVEMSLSK 386
           PVVRFKN +E+  + ERW +K A+G  + RRQVPL LAWAFSIHKSQGLTLDCVEMSLSK
Sbjct: 515 PVVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLKLAWAFSIHKSQGLTLDCVEMSLSK 574

Query: 385 IFEAGQAYVALSRAQSLETLRVLDFDSRYVWADPNVLEFYQKFRRRLQQMEIVPLGRPLA 206
           +FEAGQAYVALSRA+SL+++R+LDFD++ VWA+P+VL+FY+ FRR+L    ++PLG    
Sbjct: 575 VFEAGQAYVALSRAKSLQSIRILDFDAKQVWANPHVLQFYKGFRRKLMDTTMIPLGPKNK 634

Query: 205 DK 200
           DK
Sbjct: 635 DK 636


>AE014134-611|AAF51102.1|  663|Drosophila melanogaster CG3238-PA
           protein.
          Length = 663

 Score =  182 bits (444), Expect = 2e-46
 Identities = 81/122 (66%), Positives = 102/122 (83%)
 Frame = -3

Query: 565 PVVRFKNKKEFTARTERWFVKNANGTLLCRRQVPLNLAWAFSIHKSQGLTLDCVEMSLSK 386
           PVVRFKN +E+  + ERW +K A+G  + RRQVPL LAWAFSIHKSQGLTLDCVEMSLSK
Sbjct: 515 PVVRFKNNQEYVCKHERWIIKTASGNHITRRQVPLKLAWAFSIHKSQGLTLDCVEMSLSK 574

Query: 385 IFEAGQAYVALSRAQSLETLRVLDFDSRYVWADPNVLEFYQKFRRRLQQMEIVPLGRPLA 206
           +FEAGQAYVALSRA+SL+++R+LDFD++ VWA+P+VL+FY+ FRR+L    ++PLG    
Sbjct: 575 VFEAGQAYVALSRAKSLQSIRILDFDAKQVWANPHVLQFYKGFRRKLMDTTMIPLGPKNK 634

Query: 205 DK 200
           DK
Sbjct: 635 DK 636


>BT009977-1|AAQ22446.1| 1287|Drosophila melanogaster RE56428p protein.
          Length = 1287

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
 Frame = +3

Query: 342  CALLKATYACPASKILDKDISTQSKVKPCDLCIENAHAKFKGT*RRHN-----NVPLAFF 506
            C + K +   P  K   K +    K  P D C +  HA + G  R  N     N+  ++F
Sbjct: 978  CNITKNSLLRPEEKEFVKYLPFFLKDNPDDTCAKAGHAAYGGAVRYSNSHERLNIEASYF 1037

Query: 507  TNHRSVLAVNSFLFLNL 557
              + ++L  ++  FL L
Sbjct: 1038 MAYHTILKSSADYFLAL 1054


>AJ249606-1|CAB56505.1| 1287|Drosophila melanogaster NPC1 protein
            protein.
          Length = 1287

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
 Frame = +3

Query: 342  CALLKATYACPASKILDKDISTQSKVKPCDLCIENAHAKFKGT*RRHN-----NVPLAFF 506
            C + K +   P  K   K +    K  P D C +  HA + G  R  N     N+  ++F
Sbjct: 978  CNITKNSLLRPEEKEFVKYLPFFLKDNPDDTCAKAGHAAYGGAVRYSNSHERLNIEASYF 1037

Query: 507  TNHRSVLAVNSFLFLNL 557
              + ++L  ++  FL L
Sbjct: 1038 MAYHTILKSSADYFLAL 1054


>AE014134-1780|AAF52874.2| 1287|Drosophila melanogaster CG5722-PA
            protein.
          Length = 1287

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
 Frame = +3

Query: 342  CALLKATYACPASKILDKDISTQSKVKPCDLCIENAHAKFKGT*RRHN-----NVPLAFF 506
            C + K +   P  K   K +    K  P D C +  HA + G  R  N     N+  ++F
Sbjct: 978  CNITKNSLLRPEEKEFVKYLPFFLKDNPDDTCAKAGHAAYGGAVRYSNSHERLNIEASYF 1037

Query: 507  TNHRSVLAVNSFLFLNL 557
              + ++L  ++  FL L
Sbjct: 1038 MAYHTILKSSADYFLAL 1054


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,102,101
Number of Sequences: 53049
Number of extensions: 356755
Number of successful extensions: 730
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)