Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N09
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   5.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 540 VETNVCFCAPGCTGS 496
           + + +C C PG TGS
Sbjct: 42  INSYICTCKPGFTGS 56


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 221 FPEDSPSLDRHACASE 174
           F  +SP++D ++C+S+
Sbjct: 7   FDRESPNIDHNSCSSD 22


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 149 YKIWHYTGVLMHKRVCQEKENLLGINW 229
           Y +   T + +   +C E + +LGI++
Sbjct: 268 YTVNASTNIFLCDEICNEGQTILGISY 294


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 149 YKIWHYTGVLMHKRVCQEKENLLGINW 229
           Y +   T + +   +C E + +LGI++
Sbjct: 268 YTVNASTNIFLCDEICNEGQTILGISY 294


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 18/77 (23%), Positives = 29/77 (37%)
 Frame = +2

Query: 95  GETFFTATTYPRLTVGNGYKIWHYTGVLMHKRVCQEKENLLGINWQPGNYPKSELSRTSP 274
           GET    T+Y R       K +H+   L  +R  +    L   N    + P  E+ + + 
Sbjct: 218 GETKRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTNKNLVSKPPHEVEKRAQ 277

Query: 275 KGIEDATPKPAGAYRPP 325
            G  +       + RPP
Sbjct: 278 DGQYEYRSLSHVSLRPP 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,421
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)