Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N09
(547 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33066| Best HMM Match : RF-1 (HMM E-Value=5.9) 66 1e-11
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_49579| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_29112| Best HMM Match : Mucin (HMM E-Value=1.7) 35 0.038
SB_26954| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_3187| Best HMM Match : WD40 (HMM E-Value=2.2e-08) 31 0.46
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 29 2.5
SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_41291| Best HMM Match : Piwi (HMM E-Value=0) 29 2.5
SB_1748| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_45521| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-23) 27 7.6
SB_37584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_40912| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_26697| Best HMM Match : EGF (HMM E-Value=7.5e-34) 27 7.6
SB_24675| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 27 7.6
SB_11540| Best HMM Match : EGF (HMM E-Value=1.5e-25) 27 7.6
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 27 7.6
>SB_33066| Best HMM Match : RF-1 (HMM E-Value=5.9)
Length = 378
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +2
Query: 59 APDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYTGVLMHKRVCQEKENLLGINWQP 235
A DTT +W P GE TATT PRL GNG+KIWHYTG L ++ +E L WQP
Sbjct: 299 ASDTTYFEWSPDGEHILTATTAPRLREGNGFKIWHYTGALKYQTDVKE---LWQATWQP 354
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 2 SGHIEVWDTRGYKKLGACSAPDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYTGVLM 181
SG +E DT + + T ++WDP G T+ ++ V NGY IW + G L+
Sbjct: 410 SGVLEFHDTGDWVCMNQAEHFMATDVEWDPTGRYVATSVSWWAHKVDNGYFIWSFQGKLL 469
Query: 182 HKRVCQEKENLLGINWQP 235
+ + L W+P
Sbjct: 470 QRHALDQFCQFL---WRP 484
>SB_49579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +2
Query: 2 SGHIEVWDTRGYKKLGACSAPDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYTGVLM 181
SG +E DT + + T ++WDP G T+ ++ V NGY IW + G L+
Sbjct: 29 SGVLEFHDTGDWVCMNQAEHFMATDVEWDPTGRYVATSVSWWAHKVDNGYFIWSFQGKLL 88
Query: 182 HKRVCQEKENLLGINWQP 235
+ + L W+P
Sbjct: 89 QRHALDQFCQFL---WRP 103
>SB_29112| Best HMM Match : Mucin (HMM E-Value=1.7)
Length = 493
Score = 35.1 bits (77), Expect = 0.038
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +2
Query: 179 MHKRVCQEKENLLGIN-WQPGNYPKSELSRTSPKGIEDAT-PKPAGAYRPPGARNKPSNF 352
+H+ C+ ++ + G +PK T PK AT PKP PG KP+N
Sbjct: 232 LHRSTCKASQSSYASKALETGTHPKPTNPATHPKPTNPATHPKPTN----PGTNPKPTN- 286
Query: 353 TLHEHEKPHKPGESP 397
H KP PG P
Sbjct: 287 -PGTHPKPMNPGTHP 300
>SB_26954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 20 WDTRGYKKLGAC---SAPDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYT 169
W T G+ + C ++ CLQ D RG FF+ + ++T+G KI YT
Sbjct: 32 WVTPGFSQSRRCKTTASAKLACLQVDSRGSPFFSECKFQKVTLG---KIKQYT 81
>SB_3187| Best HMM Match : WD40 (HMM E-Value=2.2e-08)
Length = 1259
Score = 31.5 bits (68), Expect = 0.46
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 47 GACSAPDTTCLQWDPRGETFFTATTYPRLTV 139
GA S+P TC++W P GE ++ T R+T+
Sbjct: 1205 GAHSSP-VTCMEWSPDGELLYSGDTDGRITM 1234
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C GAT D GL G+SC+C V F G+
Sbjct: 712 CIHGATCHD--GLLGYSCACAVGFTGI 736
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 185 KRVCQEKENLLGINWQPGNYPKSELSRTSPKGIEDATPKP 304
+RVCQ E + G W+ GN+ E+S T+ + + + P P
Sbjct: 252 RRVCQLIECVHGAKWRAGNW--DEVSATTRRKLTELLPVP 289
>SB_2651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Frame = +2
Query: 197 QEKENLLGIN------WQPGNYPKSELSRTSPKGIEDATPKPAGAYRPPGARNKPSNFTL 358
QE+ + GI W N + + + + A PKPA ++PP R P
Sbjct: 174 QERHHFFGIQTDDFGQWSAANVHHERMKKAWEEYLATA-PKPAANWKPPEPRAAP----- 227
Query: 359 HEHEKPHKPGESPNVAPSK 415
PHKP P P K
Sbjct: 228 ----VPHKPQSKPKKTPHK 242
>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
Length = 598
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +2
Query: 83 WDPRGETFFTATTYPRLTVGNGYKIWHYTGVLMHKRVCQEKENLLGINWQPGNYPKSELS 262
WD RG++FF A T ++W H + C KE L G Q GN +SE
Sbjct: 90 WDMRGKSFFEART---------VEVWALV-CFSHPKWC-PKEKLEGFARQMGNVCRSEGM 138
Query: 263 RTSP 274
R +P
Sbjct: 139 RMNP 142
>SB_1748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 296 PKPAGAYRPPGARNKPSNFTLHEHEKPHKPGESPNVAPSKQAI 424
P+P G P TL+ + SP AP KQA+
Sbjct: 479 PEPQGCDYPDNEHTDTVGITLNSKSNEKQDSPSPRSAPKKQAV 521
>SB_45521| Best HMM Match : F5_F8_type_C (HMM E-Value=8.6e-23)
Length = 247
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C +GAT D G++CSCK+ + G+
Sbjct: 10 CLNGATCTDHVN--GYTCSCKLGYTGI 34
>SB_37584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 9 TSKCGTRAGTRSWARAPPPTRPACS 83
+SK G +SW RAPP R CS
Sbjct: 5 SSKLTLTKGNKSWYRAPPRGRRNCS 29
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 270 HRKGSRTLHRNPRGRTDLQARGTNRRTLPCTNMRN 374
HR GSR HRN D A T+ T+P + R+
Sbjct: 5277 HRHGSRGRHRNEEDIGDDDADDTSSYTIPMRSHRH 5311
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 27.5 bits (58), Expect = 7.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 143 NGYKIWHYTGVLMHKRVCQEKENLLGINWQPGN-YPKSELSRTSPKGIEDATPKPAGAYR 319
N K + T +L K C+E LG++ PGN Y + S+T +P+P + R
Sbjct: 863 NVAKYYPATELLSDKDRCKELMKSLGLSSDPGNWYSPARRSKT-------PSPRPPSS-R 914
Query: 320 PPGARNKPSNFT 355
P R +FT
Sbjct: 915 PSSRRRNMESFT 926
>SB_40913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C +GAT D G++CSCK+ + G+
Sbjct: 376 CLNGATCTDHVN--GYTCSCKLGYTGI 400
>SB_40912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C +GAT D G++CSCK+ + G+
Sbjct: 233 CLNGATCTDHVN--GYTCSCKLGYTGI 257
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C +GAT D G++CSCK+ + G+
Sbjct: 271 CLNGATCTDHVN--GYTCSCKLGYTGI 295
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 314 YRPPGARNKPSNFTLHEHEKPHKPGESP 397
Y P + +P T EHEK HKP E P
Sbjct: 338 YNPKNSHFQPIKKTSREHEKLHKP-EGP 364
>SB_26697| Best HMM Match : EGF (HMM E-Value=7.5e-34)
Length = 684
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C +GAT D G++CSCK+ + G+
Sbjct: 447 CLNGATCTDHVN--GYTCSCKLGYTGI 471
>SB_24675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 195 VKRRRIFWELIGNRVITRRVNYREHHRKGSRTL 293
VK + LIG TR N+ E H G+RT+
Sbjct: 87 VKHSNVVVNLIGRGFETRNFNFEEVHVDGARTI 119
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -3
Query: 209 SPSLDRHACASEHRCNAKFCSHCRQ*AWG 123
S + H S H + FC+HC WG
Sbjct: 234 SKKIKGHHFVSTHYTSTTFCNHCSNLLWG 262
>SB_11540| Best HMM Match : EGF (HMM E-Value=1.5e-25)
Length = 103
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDGL 337
C +GAT D G++CSCK+ + G+
Sbjct: 74 CLNGATCTDHVN--GYTCSCKLGYTGI 98
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 417 CFDGATLGDSPGLWGFSCSCKVKFDG 340
C +G T D G+ GF+CSC + F G
Sbjct: 221 CLNGGTCVD--GINGFNCSCFIGFTG 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,996,068
Number of Sequences: 59808
Number of extensions: 460875
Number of successful extensions: 1796
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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