Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N09
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66496-3|CAA91279.2| 570|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 32 0.23
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 31 0.54
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 31 0.54
U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical pr... 30 1.2
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 29 2.9
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 29 2.9
AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical ... 29 2.9
AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical ... 29 2.9
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 29 2.9
AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein. 29 2.9
Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical pr... 28 3.8
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 5.0
AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 27 6.7
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 27 6.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 27 6.7
Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 27 8.8
AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z66496-3|CAA91279.2| 570|Caenorhabditis elegans Hypothetical
protein E04D5.1a protein.
Length = 570
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Frame = +2
Query: 5 GHIEVWDTRGYKKLGACSAPDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYTGVLMH 184
G +E WD K++ + P+TT W P G+ F T TT PRL + N Y+ WHYTG ++
Sbjct: 343 GKMEFWDVETKKEIISIEVPNTTLFDWAPDGQHFVTCTTAPRLRIDNSYRFWHYTGRMLA 402
Query: 185 KRVCQEKENLLGINWQP----GNYPKSELSRTS------PKGIEDATPK----PAGAYRP 322
+ + + L + W+P + EL++T P +DA+ PAGA R
Sbjct: 403 ETHFESPKELWEVRWRPMTGYNKFAIKELTKTDKMAAGLPIRKKDASHPLNNVPAGAVRQ 462
Query: 323 PGARNKP 343
GA P
Sbjct: 463 AGAYIPP 469
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 251 SELSRTSPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPHKPGESPNVAPSK 415
S+ S +S EDA P PP R S+ +L + P KP P V P++
Sbjct: 175 SDSSSSSSSDSEDAAGPPRMTGAPPSIRMVSSSSSLKKLPAPRKPSPPPAVEPTR 229
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 31.1 bits (67), Expect = 0.54
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 269 SPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPHKPGESPNVAPSKQAIKQ 430
+PKG + P P + PP A P LH++E P ++ + AP+ Q K+
Sbjct: 323 APKGYD--APAPTAPHPPPPAPVAPPK--LHDYESPAPVADAHDAAPAAQPYKR 372
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 31.1 bits (67), Expect = 0.54
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 83 WDPRGETFFTATTY-PRLTVGNGYKIWHYTGVLMHKRVCQEK-ENLLGINWQPGNYPKSE 256
WDP G F T +T R GY+I+ + G + +C++ + L W+P P +
Sbjct: 565 WDPTGRYFVTCSTLGGRAGADLGYRIFTFQG----RELCRKNLDRLAQFKWRP--RPPVK 618
Query: 257 LSRTSPKGIEDATPKPAGAY 316
LS + I+ K A +
Sbjct: 619 LSEQKQREIKKNLKKTAAKF 638
>U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical
protein C33H5.6 protein.
Length = 248
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 5 GHIEVWDTRGYKKLGACSAPDTTCLQWDPRGETFFTAT 118
G I ++DTR ++ G A T + +DP G F AT
Sbjct: 134 GEIRMFDTRTFENYGCLLAGHTPLIAFDPDGILFAVAT 171
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +2
Query: 233 PGNYPKSELSRTSPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPHKPGES 394
PG P S S T P+G TP A A G+ PS+ + H + K GES
Sbjct: 608 PGPVPLSGTS-TLPRGSNTNTPSSANASWTGGSEFTPSSLFPYSHSR-SKSGES 659
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 260 SRTSPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPH 379
SR + G+E+A P+ A +RP R+ N TL +PH
Sbjct: 61 SRRAQPGLEEAGPRGARDHRP---RHSAGNTTLLPRRRPH 97
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 38 KKLGACSAPDTTCLQWDPRGETFFTATTYPRLTVGNGY 151
KKL P+ CL WD G F+ T + + GN Y
Sbjct: 214 KKLHVVRLPE--CLDWDYWGALFYVGTLFTTIGYGNIY 249
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 38 KKLGACSAPDTTCLQWDPRGETFFTATTYPRLTVGNGY 151
KKL P+ CL WD G F+ T + + GN Y
Sbjct: 214 KKLHVVRLPE--CLDWDYWGALFYVGTLFTTIGYGNIY 249
>AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical
protein H38K22.5a protein.
Length = 618
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 56 SAPDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYTG 172
S+ + CL W R TA+T L + + ++W YTG
Sbjct: 481 SSNSSVCLAWTLRSSGIKTASTADCLKIFHKTQLWLYTG 519
>AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical
protein Y116A8B.1 protein.
Length = 207
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 260 SRTSPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPH 379
SR + G+E+A P+ A +RP R+ N TL +PH
Sbjct: 59 SRRAQPGLEEAGPRGARDHRP---RHSAGNTTLLPRRRPH 95
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 5 GHIEVWDTRGYKKLGACSAPDTTCLQ--WDP 91
G + +WD R +K +G A D+TC+ W P
Sbjct: 518 GKLFIWDWRTHKIVGKWKAHDSTCIAALWHP 548
>AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein.
Length = 618
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 56 SAPDTTCLQWDPRGETFFTATTYPRLTVGNGYKIWHYTG 172
S+ + CL W R TA+T L + + ++W YTG
Sbjct: 481 SSNSSVCLAWTLRSSGIKTASTADCLKIFHKTQLWLYTG 519
>Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical
protein C33D3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 236 PVAN*FPEDSPSLDRHACASEHRCNAKFCSHC 141
PV N P P H C C A CSHC
Sbjct: 120 PVQNKLPSTPPE---HVCEKCSHCTAIICSHC 148
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 408 GATLGDSPGLWGFSCSCKVKFDGLFRAPGGRYAPAGFGVASS 283
GA G+ G G CSC + G APG AP G A +
Sbjct: 98 GAAAGEGGGGGGSCCSCGIGAAGPAGAPGKDGAPGEDGKAGN 139
>AF098986-3|AAC67424.1| 832|Caenorhabditis elegans Hypothetical
protein C36C9.1 protein.
Length = 832
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 261 REHHRKGSRTLHRNPRGRTDLQAR 332
R+HH++GSR R G T++Q R
Sbjct: 265 RKHHQEGSRNDRRRSHGSTNVQDR 288
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 200 EKENLLGINWQPGNYPKSELSRTSPKGIEDATPKPAGAYRPPGARNKP--SNFTLHEHEK 373
E +++LG + PK+ SP G D + Y P ++ P S ++ + +
Sbjct: 155 EVDDILGDSTNSSFNPKNPFGGPSPSGFPDLGSPGSSNYNPASQKSSPPLSKYSQNNQGQ 214
Query: 374 PHKPGES--PNVAP 409
+ P PN++P
Sbjct: 215 RNSPPNHGYPNMSP 228
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +2
Query: 200 EKENLLGINWQPGNYPKSELSRTSPKGIEDATPKPAGAYRPPGARNKP--SNFTLHEHEK 373
E +++LG + PK+ SP G D + Y P ++ P S ++ + +
Sbjct: 155 EVDDILGDSTNSSFNPKNPFGGPSPSGFPDLGSPGSSNYNPASQKSSPPLSKYSQNNQGQ 214
Query: 374 PHKPGES--PNVAP 409
+ P PN++P
Sbjct: 215 RNSPPNHGYPNMSP 228
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.5 bits (58), Expect = 6.7
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +2
Query: 224 NWQPGNYPKSELSRTSPKGIEDAT-PKPAGAYRPPGARNKPSNFTLHEHEKPHKPGESPN 400
NW N P S P G D P P G P NKP +E P+KPG +
Sbjct: 1035 NWPSPNGP----SPNGPNGPSDPNKPGPNGP-NGPSDPNKPGPNGPNEPSDPNKPGPNGP 1089
Query: 401 VAPS 412
PS
Sbjct: 1090 NGPS 1093
>Z46676-6|CAA86666.1| 503|Caenorhabditis elegans Hypothetical
protein C08B11.8 protein.
Length = 503
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 527 FVFVRPVARAQGTRRRGLSPQLYALCVLRVSLFVL 423
++F P TR + +SP LYAL +L SL V+
Sbjct: 163 YIFYLPPLIFYFTRSKKMSPILYALALLYPSLLVI 197
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +2
Query: 218 GINWQPGNYPKSELSRTSPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPHKP-GES 394
G+N PG PK +P + P G PPG P P GE
Sbjct: 116 GLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEP 175
Query: 395 PNVAPS 412
N P+
Sbjct: 176 GNKGPA 181
>AF067936-7|AAC19215.1| 316|Caenorhabditis elegans Hypothetical
protein C24G6.8 protein.
Length = 316
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 245 PKSELSRTSPKGIEDATPKPAGAYRPPGARNKPSNFTLHEHEKPHKPGESPN 400
P S +S +S + + D P P+ RP RN T P +P E N
Sbjct: 81 PSSAISISS-QALSDPVPTPSDTSRPGILRNDEQGSTSSHPVDPQEPNEVNN 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,094,269
Number of Sequences: 27780
Number of extensions: 320872
Number of successful extensions: 1274
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1273
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -