Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N09
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       26   0.22 
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   3.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   3.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.2  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 233 PGNYPKSELSRTSPKGIEDATPKPAGAYRPPGA 331
           P N+  S++S  S   +  A   PAG   PP A
Sbjct: 381 PPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSA 413


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 339 NRRTLPCTNMRNPINRENLPM 401
           N   + C N   P+ REN+ M
Sbjct: 324 NNSAIGCWNEHQPLQRENMDM 344


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 62  PDTTCLQWDPRGETFFTATTYPRLTVGNGYK 154
           P+ T  QWD      F+ T    L V   YK
Sbjct: 421 PERTPYQWDNSTSAGFSQTNKTWLPVNENYK 451


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 98  ETFFTATTYPRLTVGNGYKIWHYTGVLMHKRVCQEKENLLGINWQPG 238
           + F+ +  YP   V  GY I +YT V        + +NL+    + G
Sbjct: 67  DMFWLSPIYPSPMVDFGYDISNYTDVHPIFGTISDLDNLVSAAHEKG 113



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 62  PDTTCLQWDPRGETFFTATTYPRLTVGNGYK 154
           P  T  QWD      F++++   L V   YK
Sbjct: 415 PARTPFQWDDSVSAGFSSSSNTWLRVNENYK 445


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 98  ETFFTATTYPRLTVGNGYKIWHYTGVLMHKRVCQEKENLLGINWQPG 238
           + F+ +  YP   V  GY I +YT V        + +NL+    + G
Sbjct: 67  DMFWLSPIYPSPMVDFGYDISNYTDVHPIFGTISDLDNLVSAAHEKG 113



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 62  PDTTCLQWDPRGETFFTATTYPRLTVGNGYK 154
           P  T  QWD      F++++   L V   YK
Sbjct: 415 PARTPFQWDDSVSAGFSSSSNTWLRVNENYK 445


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 339 NRRTLPCTNMRNPINRENLPM 401
           N   + C N   P+ R+N+ M
Sbjct: 324 NNSAIGCWNEHQPLQRQNMDM 344


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = -1

Query: 409 WRHIGRFSRFMGFLMFVQGKVRRFVPRAW 323
           +R +GR    + F+  ++ K+++F+PR +
Sbjct: 205 FRRMGREVFAVNFMNVMRMKLKQFMPRLY 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,648
Number of Sequences: 438
Number of extensions: 4174
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)