SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N08
         (388 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56EB7 Cluster: PREDICTED: similar to CG9734-PB,...    38   0.067
UniRef50_Q5F6E3 Cluster: Putative uncharacterized protein; n=1; ...    36   0.21 
UniRef50_Q140F5 Cluster: Putative short-chain dehydrogenase/oxid...    36   0.21 
UniRef50_Q5NA57 Cluster: Putative uncharacterized protein OSJNBa...    34   1.1  
UniRef50_Q1VR06 Cluster: Putative uncharacterized protein; n=2; ...    33   1.4  
UniRef50_UPI00015B4878 Cluster: PREDICTED: hypothetical protein;...    33   2.5  
UniRef50_A5FIH9 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q9KTG7 Cluster: Putative uncharacterized protein VC0935...    32   4.4  
UniRef50_A4CNY1 Cluster: Putative rhamnosidase; n=1; Robiginital...    31   5.8  
UniRef50_A6RPH4 Cluster: Putative uncharacterized protein; n=1; ...    31   5.8  
UniRef50_Q7S8I8 Cluster: Predicted protein; n=1; Neurospora cras...    31   7.7  
UniRef50_Q9ZNG6 Cluster: Na(+)/H(+) antiporter subunit A; n=23; ...    31   7.7  

>UniRef50_UPI0000D56EB7 Cluster: PREDICTED: similar to CG9734-PB,
           isoform B; n=2; Tribolium castaneum|Rep: PREDICTED:
           similar to CG9734-PB, isoform B - Tribolium castaneum
          Length = 168

 Score = 37.9 bits (84), Expect = 0.067
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +3

Query: 132 MGNWISQF-WWGGDPDEVNPISGLTRREIYAVQKSWAPVFANSIPNGAELLRRLLSNIFR 308
           MG  IS + ++    D+ +P++ LT RE++ VQ SW P+  +    G +LL  L      
Sbjct: 1   MGQLISLYKYYTTRTDDPDPLTTLTSREVFLVQSSWDPIKKDLTGYGVQLLLFLFKKYPE 60

Query: 309 RTQEF 323
             Q F
Sbjct: 61  EQQNF 65


>UniRef50_Q5F6E3 Cluster: Putative uncharacterized protein; n=1;
           Neisseria gonorrhoeae FA 1090|Rep: Putative
           uncharacterized protein - Neisseria gonorrhoeae (strain
           ATCC 700825 / FA 1090)
          Length = 327

 Score = 36.3 bits (80), Expect = 0.21
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +3

Query: 207 REIYAVQKSWAPVFANSIPNGAELLRRLLSNIFRRTQEFLQDDP 338
           RE       W   F N  PN  +L+ R LSN+F   +EFL+D P
Sbjct: 125 REASQAVAQWTKDFDNLSPNQRQLVLRPLSNLFAAYEEFLKDAP 168


>UniRef50_Q140F5 Cluster: Putative short-chain
           dehydrogenase/oxidoreductase; n=1; Burkholderia
           xenovorans LB400|Rep: Putative short-chain
           dehydrogenase/oxidoreductase - Burkholderia xenovorans
           (strain LB400)
          Length = 245

 Score = 36.3 bits (80), Expect = 0.21
 Identities = 13/56 (23%), Positives = 30/56 (53%)
 Frame = +3

Query: 24  PGGSLDILIFIYLSSVFILLTAIVVLKRVKTGQKITMGNWISQFWWGGDPDEVNPI 191
           P    D++   ++++V +    + +L++ K G+ + + + +   WW  DPD  NP+
Sbjct: 107 PQAMRDVIEINFIATVIVTQNMLPLLRKSKHGRIVNVSSRVGSLWWNSDPD--NPV 160


>UniRef50_Q5NA57 Cluster: Putative uncharacterized protein
           OSJNBa0010K01.26; n=2; Oryza sativa|Rep: Putative
           uncharacterized protein OSJNBa0010K01.26 - Oryza sativa
           subsp. japonica (Rice)
          Length = 469

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = -2

Query: 360 VFFVRQFADH-LEGILVFCGKCLTTIVLK-APHRWVLSSQILVPTISERRIFLFSSVRIL 187
           V  +  F D  LEG+L+  G CL++++L      W  S  I+  +IS+R     + +RI+
Sbjct: 280 VIVISLFLDRQLEGLLLILGDCLSSLILYFNSSEWESSCLIVAQSISQRVTMDLNCLRIV 339

Query: 186 DSL 178
           D +
Sbjct: 340 DCI 342


>UniRef50_Q1VR06 Cluster: Putative uncharacterized protein; n=2;
           Flavobacteriaceae|Rep: Putative uncharacterized protein
           - Psychroflexus torquis ATCC 700755
          Length = 265

 Score = 33.5 bits (73), Expect = 1.4
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -3

Query: 206 SRQSGYWIHFIRITAPPELAYPVAHCYLLSSFNSLQNNDRGQ*NKYGR 63
           S  S +W+++++      L Y  +H Y  + +N  + N  G+ N YG+
Sbjct: 141 SNGSSFWVYYVQYRFMSSLFYGSSHRYYRNDYNYYRTNHYGKSNYYGK 188


>UniRef50_UPI00015B4878 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 686

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 138 NWISQFWWGGDPDEVNPISGLTRREIYAVQKSWAPVFANSIPN 266
           N+ISQF  GGDPDE+N      R+ +Y+  +++       I N
Sbjct: 8   NYISQF--GGDPDELNQFCNSFRKVLYSFSRAYEDYLLMYIAN 48


>UniRef50_A5FIH9 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 566

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -3

Query: 248 KYWCPRFLNGVYFSSRQSGYWIHFIRITAP-PELAYPVAHCYLLSSFNSLQNN 93
           K W  +   G  F  +Q   WI F     P PE  YP+   +  +++NSL+N+
Sbjct: 222 KNWIDQLTQGDNFIDKQKSQWIKFFEALGPLPEGKYPLLEKF-STNWNSLENS 273


>UniRef50_Q9KTG7 Cluster: Putative uncharacterized protein VC0935;
           n=15; Vibrio cholerae|Rep: Putative uncharacterized
           protein VC0935 - Vibrio cholerae
          Length = 398

 Score = 31.9 bits (69), Expect = 4.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 233 RFLNGVYFSSRQSGYWIHFIRITAPPEL 150
           RF NG YFSS+Q  +  H++ +T+  EL
Sbjct: 91  RFRNGTYFSSQQDNFTDHYLDLTSDWEL 118


>UniRef50_A4CNY1 Cluster: Putative rhamnosidase; n=1; Robiginitalea
           biformata HTCC2501|Rep: Putative rhamnosidase -
           Robiginitalea biformata HTCC2501
          Length = 1204

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 96  VLKRVKTGQKITMGNWISQFWWGGD 170
           V  R++   +  +G W+S+ WWGG+
Sbjct: 458 VTDRIRPASENVLGGWLSEGWWGGN 482


>UniRef50_A6RPH4 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 491

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 199 SPDIGFTSSGSPPHQNWLIQLPIVIFCPVLTLFKTTIAVNKIN 71
           SP +GFT     PH +  + +  +I   V+  F T  AV+ I+
Sbjct: 351 SPAVGFTGEDIEPHLSMPVGITTLIIATVVLAFNTAFAVDSID 393


>UniRef50_Q7S8I8 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 1044

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 261 VLSSQILVPTISERRIFLFSSVRILDSLHPDHRPTRTGLSSCP 133
           +LS+ +    ++E R F F  VR++DSL       +TG + CP
Sbjct: 259 ILSTVLARAPLTEARYFDFQPVRLIDSLLAKATQAKTGENICP 301


>UniRef50_Q9ZNG6 Cluster: Na(+)/H(+) antiporter subunit A; n=23;
           Bacillales|Rep: Na(+)/H(+) antiporter subunit A -
           Staphylococcus aureus
          Length = 801

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -1

Query: 160 HQNWLI-QLPIVIFCPVLTLFKTTIAVNKI 74
           H  W +  +PIVIF  +LTL KTT++ N +
Sbjct: 29  HLGWFVLSVPIVIFIYMLTLIKTTMSGNTV 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,218,968
Number of Sequences: 1657284
Number of extensions: 8037083
Number of successful extensions: 22413
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22411
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -