Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N08
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   5.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   7.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   9.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   9.8  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 170 ITAPPELAYPVAHCYLLSSFNSLQN 96
           IT P   A P+A+ +  +SFN   N
Sbjct: 265 ITTPSPSASPLAYQHEYNSFNWTAN 289


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 36  LDILIFIYLSSVFILLTAIVVLKRVKTGQK 125
           LD+L+FI ++ V +L    V L  + T  +
Sbjct: 215 LDLLVFITINFVVLLGDLYVTLYIILTNNQ 244


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 41  YINIYLLVFRIYFIDRDRCFEES*NWTEDNN 133
           Y++ +L+V   + +  + CF +   W   NN
Sbjct: 82  YLDEFLIVALAFQVILNSCFCDPAKWIRLNN 112


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 41  YINIYLLVFRIYFIDRDRCFEES*NWTEDNN 133
           Y++ +L+V   + +  + CF +   W   NN
Sbjct: 82  YLDEFLIVALAFQVILNSCFCDPAKWIRLNN 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,513
Number of Sequences: 336
Number of extensions: 2005
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)