Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N06
         (526 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096285-1|AAH96285.1|  574|Homo sapiens CYP11B1 protein protein.      34   0.35 
EF064713-1|ABK41896.1|  468|Homo sapiens tumor necrosis factor r...    29   7.6  
BT006906-1|AAP35552.1|  468|Homo sapiens tumor necrosis factor r...    29   7.6  
BC012866-1|AAH12866.1|  468|Homo sapiens tumor necrosis factor r...    29   7.6  

>BC096285-1|AAH96285.1|  574|Homo sapiens CYP11B1 protein protein.
          Length = 574

 Score = 33.9 bits (74), Expect = 0.35
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 387 RLSRLYSNWSNNRFRRCLWRCYSRNWCR 304
           R S  +  W  +  R  LWRC  R WCR
Sbjct: 82  RHSASFGRWGRSAARAGLWRCQGRGWCR 109


>EF064713-1|ABK41896.1|  468|Homo sapiens tumor necrosis factor
           receptor superfamily, member 10a protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
 Frame = -2

Query: 453 PGVVTGCAEGVGLTGHRFNLIRRLSRLYSNWSNNRFRRCLWRCYSRNWCRPRW--NWNSG 280
           PG    C EGVG T    NL   L              C     +   C+P    N NS 
Sbjct: 142 PGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSA 201

Query: 279 SLCRNLSR 256
            +CR  SR
Sbjct: 202 EMCRKCSR 209


>BT006906-1|AAP35552.1|  468|Homo sapiens tumor necrosis factor
           receptor superfamily, member 10a protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
 Frame = -2

Query: 453 PGVVTGCAEGVGLTGHRFNLIRRLSRLYSNWSNNRFRRCLWRCYSRNWCRPRW--NWNSG 280
           PG    C EGVG T    NL   L              C     +   C+P    N NS 
Sbjct: 142 PGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSA 201

Query: 279 SLCRNLSR 256
            +CR  SR
Sbjct: 202 EMCRKCSR 209


>BC012866-1|AAH12866.1|  468|Homo sapiens tumor necrosis factor
           receptor superfamily, member 10a protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 21/68 (30%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
 Frame = -2

Query: 453 PGVVTGCAEGVGLTGHRFNLIRRLSRLYSNWSNNRFRRCLWRCYSRNWCRPRW--NWNSG 280
           PG    C EGVG T    NL   L              C     +   C+P    N NS 
Sbjct: 142 PGACNRCTEGVGYTNASNNLFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSA 201

Query: 279 SLCRNLSR 256
            +CR  SR
Sbjct: 202 EMCRKCSR 209


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,737,262
Number of Sequences: 237096
Number of extensions: 1459389
Number of successful extensions: 3440
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3426
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)