Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N06
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    29   1.5  
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U39651-4|AAA80396.1|   78|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U39651-3|AAA80395.1|  175|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U39651-1|AAA80393.2|  260|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    28   4.7  
U80024-3|AAK18893.1|  342|Caenorhabditis elegans Seven tm recept...    27   6.2  
Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
           efl-1 mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 419 PTPSAHPVTTPGPGSVKQLVNFYDSQVKGSP 511
           P P A P+  P P  V       DS++KG P
Sbjct: 530 PLPPASPIAAPAPVPVASASTSSDSKIKGGP 560


>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical protein
            T20F7.5 protein.
          Length = 1065

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 19/65 (29%), Positives = 36/65 (55%)
 Frame = +1

Query: 28   RFESYRNILKLVPNIIKI*QHITQLVVRKMKAAMFILFLAIYSSECRKTYKPIDKNANID 207
            RFE+ ++ +K+ PNI +    I Q V++K+  A ++L L   +   RK+   + +  N D
Sbjct: 863  RFEATKSNIKVSPNIDECPDEIDQSVIQKLLDAKYLLDLENSNRLERKSSSTVPEK-NED 921

Query: 208  FINME 222
             + +E
Sbjct: 922  ELRVE 926


>U39651-4|AAA80396.1|   78|Caenorhabditis elegans Hypothetical
           protein ZK470.2b protein.
          Length = 78

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 419 PTPSAHPVTTPGPGS 463
           P P++ PVTTP PGS
Sbjct: 29  PAPTSAPVTTPAPGS 43


>U39651-3|AAA80395.1|  175|Caenorhabditis elegans Hypothetical
           protein ZK470.2a protein.
          Length = 175

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 419 PTPSAHPVTTPGPGS 463
           P P++ PVTTP PGS
Sbjct: 126 PAPTSAPVTTPAPGS 140


>U39651-1|AAA80393.2|  260|Caenorhabditis elegans Hypothetical
           protein ZK470.2c protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 419 PTPSAHPVTTPGPGS 463
           P P++ PVTTP PGS
Sbjct: 211 PAPTSAPVTTPAPGS 225


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = -2

Query: 339 CLWRCYSRNWCRPRWNWNSGSLCRNLSRARITTVLCATAFHINEINICIFINGLVCFA 166
           CL +C   + CR   + N  SLC+ LSR  + +V     +     ++ ++ N  V +A
Sbjct: 140 CLSQCQKESSCRAALHNNDTSLCQ-LSRVSLNSVYNPRLYFKASYSVDLYENNCVDYA 196


>U80024-3|AAK18893.1|  342|Caenorhabditis elegans Seven tm receptor
           protein 190 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 237 LCATAFHINEINICIFINGLVCF 169
           +C T+F ++   +C+FI G++C+
Sbjct: 198 VCQTSFMVSSSLMCVFIFGVLCY 220


>Z92786-6|CAB07208.1|  569|Caenorhabditis elegans Hypothetical
           protein F47H4.9 protein.
          Length = 569

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
 Frame = +1

Query: 109 RKMKAAMFILFLAIYSSECRKTYKPID---KNANIDFI 213
           +K+K  +F LF+++  S+ +K YK ++   +N+N  +I
Sbjct: 377 KKLKLKVFQLFISVEKSDHQKIYKTMNTVLRNSNCSYI 414


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,433,658
Number of Sequences: 27780
Number of extensions: 232241
Number of successful extensions: 568
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)