Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N02
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.8  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   3.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   3.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   4.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   4.2  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   4.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   4.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   4.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   4.2  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    22   4.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   4.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   5.6  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   5.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   5.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   5.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.4  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -1

Query: 165 NPSSDILYSVNASLRSLTIQFNLYHTTTTNQTCSPGI 55
           +P  + LY + A      + +N ++   +   CSPG+
Sbjct: 92  SPHCERLYGIFADESKCDVFWNCWNGEASRYQCSPGL 128


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -1

Query: 165 NPSSDILYSVNASLRSLTIQFNLYHTTTTNQTCSPGI 55
           +P  + LY + A      + +N ++   +   CSPG+
Sbjct: 92  SPHCERLYGIFADESKCDVFWNCWNGEASRYQCSPGL 128


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 242 VVAPIVTSTTFKQTAPTVHN 301
           VVA + + TTFK  A T+ N
Sbjct: 85  VVAVLSSGTTFKLVAKTLEN 104


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 242 VVAPIVTSTTFKQTAPTVHN 301
           VVA + + TTFK  A T+ N
Sbjct: 85  VVAVLSSGTTFKLVAKTLEN 104


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 211 TSVNSLSRKPSFWLQKS 161
           T +N+ SRKPSF +Q S
Sbjct: 410 TRLNNESRKPSFVIQFS 426


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 104  LTSTTQPPLTKPAARGSTSSRAAPPRG 24
            L  T  PP +  +  GST S++ P  G
Sbjct: 1106 LKGTAVPPPSGSSGPGSTGSKSPPVAG 1132



 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 512  KNGYRHHIYRFH 547
            K  YRHH+ + H
Sbjct: 1066 KGAYRHHLSKMH 1077


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 250 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 281


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 184 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 215


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 16  TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 47


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 252 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 283


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 228 TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 259


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 356 PRSFGGRE-TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           PR  G +  TRF        +H+N + T++R   +    C+
Sbjct: 5   PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 45


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 413 YHYNRFTTQQR 445
           +HYNR+ T++R
Sbjct: 252 FHYNRYLTRRR 262


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 413 YHYNRFTTQQR 445
           +HYNR+ T++R
Sbjct: 252 FHYNRYLTRRR 262


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 413 YHYNRFTTQQR 445
           +HYNR+ T++R
Sbjct: 252 FHYNRYLTRRR 262


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 356 PRSFGGRE-TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           PR  G +  TRF        +H+N + T++R   +    C+
Sbjct: 156 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 196


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 356 PRSFGGRE-TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           PR  G +  TRF        +H+N + T++R   +    C+
Sbjct: 215 PRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCL 255


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 294 STMVMNTGRSGNPTRNTLEECLAALEGGKHALVFASGL 407
           ST++ +TG   N +   + E + AL+   + LVF+  L
Sbjct: 115 STVLTSTGLRRNLSSLQIGEKIQALDPSTNELVFSEVL 152


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = +2

Query: 137  TEYKMSEDGFLKPKTGFATQAIHAGQDPDKWDSAAVVAPIVTST 268
            T Y M    +     G  T  IH   + D  ++   V  +V ST
Sbjct: 1171 TNYSMEVLAYTSGGDGVRTTPIHCQTEQDVPEAPIAVKALVMST 1214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,792
Number of Sequences: 336
Number of extensions: 2548
Number of successful extensions: 25
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)