Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N02
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 94 6e-20
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 93 1e-19
Z81467-4|CAB03873.2| 451|Caenorhabditis elegans Hypothetical pr... 57 8e-09
Z81467-5|CAN86602.1| 172|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical p... 29 3.1
AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical ... 29 3.1
U41264-9|AAA82429.3| 240|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/85 (50%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLL 497
R GNPTR+ L++ LAALEG KH F+SGL A++ + +LL+ GDHI+ SDDVYGGT R +
Sbjct: 51 RGGNPTRDVLQKNLAALEGAKHCQAFSSGLAASSAVINLLNHGDHIVCSDDVYGGTIRYI 110
Query: 498 RQV-VSRMGIDTTFTDFTDLEKVTK 569
RQ+ V + G++ D TD++ + K
Sbjct: 111 RQIAVKKYGMEVDSVDLTDVQNLEK 135
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 185 FATQAIHAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYRK 319
F T A+H GQ+P++WD VV PI STT+KQ P Y+Y +
Sbjct: 7 FGTDAVHVGQEPEQWDINQVVPPISMSTTYKQDNPGEPKRYDYAR 51
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/85 (52%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLL 497
R+GNPTR+ L++ LAALE KH VF+SGL AT+ I +LL GDHI+ SDDVYGGT R +
Sbjct: 51 RAGNPTRDVLQKNLAALEDAKHCQVFSSGLAATSAIINLLKYGDHIVCSDDVYGGTQRYI 110
Query: 498 RQV-VSRMGIDTTFTDFTDLEKVTK 569
R+V V G++ D TD++ + K
Sbjct: 111 RRVAVPNHGLEVDSVDLTDVQNLEK 135
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +2
Query: 185 FATQAIHAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYRK 319
F T AIH GQ+P++WD VV PI S+T+KQ P G++Y +
Sbjct: 7 FGTAAIHVGQEPEQWDMNQVVPPISLSSTYKQDNPGEPKGHDYSR 51
>Z81467-4|CAB03873.2| 451|Caenorhabditis elegans Hypothetical
protein C12C8.2a protein.
Length = 451
Score = 57.2 bits (132), Expect = 8e-09
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTI-ASLLSKGDHILSSDDVYGGTNRL 494
R GNPT +E + +EGG +L++ SGL A + + LS G H++ + +Y GT+
Sbjct: 113 RCGNPTTENVEVVINEIEGGAGSLLYNSGLAAISAVFLEFLSSGAHMIVMNPIYSGTSSF 172
Query: 495 LRQVVSRMGIDTTFTD 542
+ + ++R G++ T D
Sbjct: 173 INETLARFGVEITSVD 188
>Z81467-5|CAN86602.1| 172|Caenorhabditis elegans Hypothetical
protein C12C8.2b protein.
Length = 172
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTI-ASLLSKGDHILSSDDVY 476
R GNPT +E + +EGG +L++ SGL A + + LS G H++ + +Y
Sbjct: 113 RCGNPTTENVEVVINEIEGGAGSLLYNSGLAAISAVFLEFLSSGAHMIVMNPIY 166
>Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 453 ILSSDDVYGGTNRLLRQVVSRMGIDTTFTDFTDLEKV 563
++SS D Y G + LLRQ + + + T DFTD E++
Sbjct: 98 VVSSSDEYSGGDGLLRQTIQK---NPTRFDFTDEEQM 131
>AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 453 ILSSDDVYGGTNRLLRQVVSRMGIDTTFTDFTDLEKV 563
++SS D Y G + LLRQ + + + T DFTD E++
Sbjct: 98 VVSSSDEYSGGDGLLRQTIQK---NPTRFDFTDEEQM 131
>U41264-9|AAA82429.3| 240|Caenorhabditis elegans Hypothetical
protein F10E7.2 protein.
Length = 240
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 208 SVNSLSRKPSFWLQKSVFRHFIFC*CVSKIVNNSI 104
S++SLSR PS ++ S +C C++ I+ SI
Sbjct: 186 SISSLSRSPSIFVPVSTVFLTTYCLCLTLILKRSI 220
>Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical
protein C07E3.6 protein.
Length = 327
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 339 NTLEECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNR 491
N L+ LAAL+ G H + F G++ A S +I DD GT++
Sbjct: 150 NVLDTVLAALQNGNHEMQFTGSGGSSDDGA---SNSSNIYDVDDEDYGTSQ 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,381,978
Number of Sequences: 27780
Number of extensions: 237662
Number of successful extensions: 705
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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