Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N02
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.70 
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    24   0.92 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   1.6  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    23   2.1  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       22   4.9  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    22   4.9  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 359 RSFGGRETRFGLCLWSWSYHYNRFTTQQ 442
           R+F   E R   CL S   +Y++  TQQ
Sbjct: 367 RNFNESENRRNSCLGSTETYYSKHNTQQ 394


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 353 MPRSFGGRET--RFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           +P    GR+T  R+        +HYNR+ T++R   +    C+
Sbjct: 5   VPERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 47


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +HYNR+ T++R   +    C+
Sbjct: 278 TRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 309


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 356 PRSFGGRE-TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           PR  G +  TRF        +HYN + T++R   +    C+
Sbjct: 7   PRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCL 47


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 412 APRPEAKTKACFPPSKAARHSSKVFLVGFPDL 317
           AP PEA+  A   P        KV   G P L
Sbjct: 28  APEPEAEADAEADPEAGIGAVLKVLTTGLPAL 59


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 380 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 475
           TR+        +H+NR+ T++R   +    C+
Sbjct: 16  TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,823
Number of Sequences: 438
Number of extensions: 2884
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)