Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_N02
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /... 79 3e-15
At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /... 79 3e-15
At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /... 79 3e-15
At3g01120.1 68416.m00016 cystathionine gamma-synthase, chloropla... 60 8e-10
At1g33320.1 68414.m04121 cystathionine gamma-synthase, chloropla... 58 5e-09
At1g64660.1 68414.m07330 Cys/Met metabolism pyridoxal-phosphate-... 55 4e-08
At1g08910.1 68414.m00991 zinc finger (MIZ type) family protein s... 31 0.54
At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family... 29 1.7
At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family... 29 1.7
At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family... 29 1.7
At5g06060.1 68418.m00671 tropinone reductase, putative / tropine... 29 2.9
At3g48790.1 68416.m05328 serine C-palmitoyltransferase, putative... 29 2.9
At1g02700.1 68414.m00221 expressed protein similar to hypothetic... 28 3.8
At3g25410.1 68416.m03160 bile acid:sodium symporter family prote... 28 5.0
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 27 6.7
At4g20040.1 68417.m02933 expressed protein C70DMY30S 27 8.8
At2g02580.1 68415.m00198 cytochrome P450 family protein 27 8.8
At1g10620.1 68414.m01204 protein kinase family protein contains ... 27 8.8
>At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 378
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLL 497
RSGNPTR+ LE LA L+ A F SG+ A + + L+ G+ I++ DDVYGG++RLL
Sbjct: 129 RSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLL 188
Query: 498 RQVVSRMGIDTTFTDFTDLEKV 563
QVV R G+ + T L++V
Sbjct: 189 SQVVPRSGVVVKRVNTTKLDEV 210
>At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 449
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLL 497
RSGNPTR+ LE LA L+ A F SG+ A + + L+ G+ I++ DDVYGG++RLL
Sbjct: 114 RSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLL 173
Query: 498 RQVVSRMGIDTTFTDFTDLEKV 563
QVV R G+ + T L++V
Sbjct: 174 SQVVPRSGVVVKRVNTTKLDEV 195
>At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 464
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLL 497
RSGNPTR+ LE LA L+ A F SG+ A + + L+ G+ I++ DDVYGG++RLL
Sbjct: 129 RSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAVTHLIKNGEEIVAGDDVYGGSDRLL 188
Query: 498 RQVVSRMGIDTTFTDFTDLEKV 563
QVV R G+ + T L++V
Sbjct: 189 SQVVPRSGVVVKRVNTTKLDEV 210
>At3g01120.1 68416.m00016 cystathionine gamma-synthase, chloroplast
/ O-succinylhomoserine (Thiol)-lyase (CGS) identical to
SP|P55217 Cystathionine gamma-synthase, chloroplast
precursor (EC 4.2.99.9) (CGS) (O-succinylhomoserine
(Thiol)-lyase) {Arabidopsis thaliana}
Length = 563
Score = 60.5 bits (140), Expect = 8e-10
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 315 GRSGNPTRNTLEECLAALEGGKHALVFASGLGATTT-IASLLSKGDHILSSDDVYGGTNR 491
GR GNPT LE+ ++ALEG + LV ASG+ A+T + +L+ G HI+++ D Y T
Sbjct: 227 GRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRI 286
Query: 492 LLRQVVSRMGIDTTFTDFTDL 554
+ + ++GI T D D+
Sbjct: 287 FMENFLPKLGITVTVIDPADI 307
>At1g33320.1 68414.m04121 cystathionine gamma-synthase, chloroplast,
putative / O-succinylhomoserine (Thiol)-lyase, putative
strong similarity to SP|P55217 Cystathionine
gamma-synthase, chloroplast precursor (EC 4.2.99.9)
(CGS) (O-succinylhomoserine (Thiol)-lyase) {Arabidopsis
thaliana}; contains Pfam profile PF01053: Cys/Met
metabolism PLP-dependent enzyme
Length = 412
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTT-IASLLSKGDHILSSDDVYGGTNRL 494
R GNPT LEE ++ LEG + LV ASG+ A+ + +L+ HI+++ D Y T
Sbjct: 78 RYGNPTTMALEEKISVLEGAESTLVMASGMYASNVMLLALVPTNGHIVATKDCYKETRIF 137
Query: 495 LRQVVSRMGIDTTFTDFTDL 554
+ ++++GI TF D D+
Sbjct: 138 MENFLTKLGITVTFIDSDDI 157
>At1g64660.1 68414.m07330 Cys/Met metabolism
pyridoxal-phosphate-dependent enzyme family protein
similar to SP|P13254 Methionine gamma-lyase (EC
4.4.1.11) (L-methioninase) {Pseudomonas putida};
contains Pfam profile PF01053: Cys/Met metabolism
PLP-dependent enzyme
Length = 441
Score = 54.8 bits (126), Expect = 4e-08
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +3
Query: 318 RSGNPTRNTLEECLAALEGGKHALVFASGLGATTTIA-SLLSKGDHILSSDDVYGGTNRL 494
R NPT L +AALEG + A +SG+ A +++ L S G H++++ +YGGT+ L
Sbjct: 97 RHFNPTVLNLSRQMAALEGTQAAYCTSSGMSAISSVMLQLCSSGGHVVAASTLYGGTHAL 156
Query: 495 LRQVVSR-MGIDTTFTDFTD 551
L + R I T+F D TD
Sbjct: 157 LSHFLPRTCNITTSFVDITD 176
>At1g08910.1 68414.m00991 zinc finger (MIZ type) family protein
similar to putative variable cytadhesin protein
(GI:7677312) {Mycoplasma gallisepticum}; contains Pfam
PF02891: MIZ zinc finger domain
Length = 842
Score = 31.1 bits (67), Expect = 0.54
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 251 PIVTSTTFKQTAPTVHNGYEYRKIWKSD*EHFRRMPRSFGG 373
P+ +S T QT P + GY +++ S H R P ++GG
Sbjct: 657 PMPSSITNLQTLPATYGGYAHQRPMSSSITHPRTSPVNYGG 697
>At5g58210.3 68418.m07288 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 523 IPILDTTCLNNLF--VPPYTSSE-DKM*SPLLSSEAIVVVAPRPEAKTKACFPPSKAARH 353
+PI++ L+ + VP TSS P++ +EA+ VV+P A T + F P+
Sbjct: 160 VPIVEAKALSEVSPSVPADTSSHFSPAPVPIVEAEALSVVSPSVPADTSSHFSPAPVPIV 219
Query: 352 SSKVFLVGFPDLP 314
+K P +P
Sbjct: 220 EAKTLSEVSPSVP 232
>At5g58210.2 68418.m07287 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 523 IPILDTTCLNNLF--VPPYTSSE-DKM*SPLLSSEAIVVVAPRPEAKTKACFPPSKAARH 353
+PI++ L+ + VP TSS P++ +EA+ VV+P A T + F P+
Sbjct: 160 VPIVEAKALSEVSPSVPADTSSHFSPAPVPIVEAEALSVVSPSVPADTSSHFSPAPVPIV 219
Query: 352 SSKVFLVGFPDLP 314
+K P +P
Sbjct: 220 EAKTLSEVSPSVP 232
>At5g58210.1 68418.m07286 hydroxyproline-rich glycoprotein family
protein
Length = 380
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 523 IPILDTTCLNNLF--VPPYTSSE-DKM*SPLLSSEAIVVVAPRPEAKTKACFPPSKAARH 353
+PI++ L+ + VP TSS P++ +EA+ VV+P A T + F P+
Sbjct: 160 VPIVEAKALSEVSPSVPADTSSHFSPAPVPIVEAEALSVVSPSVPADTSSHFSPAPVPIV 219
Query: 352 SSKVFLVGFPDLP 314
+K P +P
Sbjct: 220 EAKTLSEVSPSVP 232
>At5g06060.1 68418.m00671 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 264
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 381 HALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGID 527
H L+ ASG+G+ I+S+ G LSS +YG T L Q+ + +
Sbjct: 132 HPLLKASGVGSIVFISSVA--GLVHLSSGSIYGATKGALNQLTRNLACE 178
>At3g48790.1 68416.m05328 serine C-palmitoyltransferase, putative
similar to serine palmitoyltransferase from Solanum
tuberosum [GI:4995890], Homo sapiens [SP|O15270], Mus
musculus [SP|P97363]
Length = 350
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 345 LEECLAALEGGKHALVFASG-LGATTTIASLLSKGDHILS 461
LEEC+A G A+VF G L + I+ L+ KG I+S
Sbjct: 15 LEECVAKFVGKPAAVVFGMGYLTNSAIISVLIGKGGLIIS 54
>At1g02700.1 68414.m00221 expressed protein similar to hypothetical
protein GB:CAB80707 GI:7268598 from [Arabidopsis
thaliana]
Length = 247
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 460 DKM*SPLLSSEAIVVVAPRPEAKTKACFPPS--KAARHSSKVFLVGFPDLPVF 308
D + +P ++E IV PRP + + PP +A H + VG P P F
Sbjct: 61 DDVANPKTAAEEIVDDTPRPSLEEQPLVPPKSPRATAHKLESTPVGHPSEPHF 113
>At3g25410.1 68416.m03160 bile acid:sodium symporter family protein
low similarity to SP|Q14973 Sodium/bile acid
cotransporter (Na(+)/bile acid cotransporter) {Homo
sapiens}; contains Pfam profile PF01758: Sodium Bile
acid symporter family
Length = 431
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -3
Query: 232 IPFIRILTSVNSLSRKPSF-WLQKSVF 155
+PF+ LT+V +LS PSF W+ K ++
Sbjct: 115 LPFVVALTAVAALSYPPSFTWVSKDLY 141
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains
Pfam profile PF00004: ATPase, AAA family
Length = 1122
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 378 KHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGIDTTFTDFTDLE 557
+ ++ F GL S SK D ++ ++V+ RLL V+ ID TF D LE
Sbjct: 771 RESIEFGIGLLQNDLKGSTSSKKDIVV--ENVF--EKRLLSDVILPSDIDVTFDDIGALE 826
Query: 558 KV 563
KV
Sbjct: 827 KV 828
>At4g20040.1 68417.m02933 expressed protein C70DMY30S
Length = 483
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +3
Query: 387 LVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGIDTTFTDFTDL 554
++F++G+G + + + G H + +GG L++ ++R ID + D+T +
Sbjct: 280 VIFSAGIGISLNGGANMVTGVHCYNKATWFGGIGILVKSHLTR--IDNCYLDYTGI 333
>At2g02580.1 68415.m00198 cytochrome P450 family protein
Length = 500
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 125 RDALTEYKMSEDGF-LKPKTGFATQAIHAGQDPDKWDSAAVVAP 253
R+ ++E++++ G+ ++PKT G+DPD W A + P
Sbjct: 372 REVMSEFEIN--GYKIQPKTLLYVNVWAIGRDPDSWKDADMFYP 413
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 101 TSTTQPPLTKPAARGSTSSRAAPP 30
+ TTQPP T P + S ++ +PP
Sbjct: 38 SETTQPPATSPPSPPSPDTQTSPP 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,799,822
Number of Sequences: 28952
Number of extensions: 231159
Number of successful extensions: 657
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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