Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_N01
         (507 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z81128-7|CAB03400.1|  898|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U28741-1|AAA68325.2|  256|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
           protein C53B4.4e protein.
          Length = 1544

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 294 KRSLSRNY-YTSFPIHLPPFYPRPIILPREPRNVF 395
           +RSL R + + ++ I   PF+P PI     P N F
Sbjct: 409 RRSLQRKHVWPNYKIRYRPFFPNPIFQASPPINSF 443


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
           protein C53B4.4d protein.
          Length = 1301

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 294 KRSLSRNY-YTSFPIHLPPFYPRPIILPREPRNVF 395
           +RSL R + + ++ I   PF+P PI     P N F
Sbjct: 238 RRSLQRKHVWPNYKIRYRPFFPNPIFQASPPINSF 272


>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
           protein C53B4.4c protein.
          Length = 1304

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 294 KRSLSRNY-YTSFPIHLPPFYPRPIILPREPRNVF 395
           +RSL R + + ++ I   PF+P PI     P N F
Sbjct: 238 RRSLQRKHVWPNYKIRYRPFFPNPIFQASPPINSF 272


>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical
           protein C53B4.4b protein.
          Length = 1586

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 294 KRSLSRNY-YTSFPIHLPPFYPRPIILPREPRNVF 395
           +RSL R + + ++ I   PF+P PI     P N F
Sbjct: 409 RRSLQRKHVWPNYKIRYRPFFPNPIFQASPPINSF 443


>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical
           protein C53B4.4a protein.
          Length = 1584

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 294 KRSLSRNY-YTSFPIHLPPFYPRPIILPREPRNVF 395
           +RSL R + + ++ I   PF+P PI     P N F
Sbjct: 409 RRSLQRKHVWPNYKIRYRPFFPNPIFQASPPINSF 443


>Z81128-7|CAB03400.1|  898|Caenorhabditis elegans Hypothetical
           protein T23D8.7 protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 443 PNNVLGWLFANLGVNRENVSGF 378
           P++ LGW   NLGV RE   GF
Sbjct: 235 PSHGLGWGTVNLGVGREVCYGF 256


>U28741-1|AAA68325.2|  256|Caenorhabditis elegans Hypothetical
           protein F35D2.3 protein.
          Length = 256

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = -1

Query: 282 NEYCECTFCW-GPVLYRQ*LKAVLDGHHSLAQVKCHCP 172
           N  CECT  + GP   R+        H +   V+CHCP
Sbjct: 40  NGKCECTLRYEGPQCERERCLNGGRRHSAKGTVRCHCP 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,449,874
Number of Sequences: 27780
Number of extensions: 214743
Number of successful extensions: 592
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)