Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M22
(456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0016 - 20240358-20240797,20241040-20241131,20241132-202412... 40 0.001
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 34 0.047
08_02_1527 - 27664106-27664171,27664357-27664524,27664893-276651... 29 1.3
10_01_0293 + 3039945-3040857,3042457-3042630,3043562-3044556 29 1.8
01_03_0127 + 12787664-12787907,12790660-12790715,12792203-127924... 29 1.8
03_05_0222 + 22082863-22082938,22083261-22083333,22083451-220834... 29 2.3
02_01_0607 - 4549248-4549290,4550193-4550337,4550438-4551185,455... 28 3.1
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 28 3.1
02_04_0241 - 21203528-21204040 28 4.1
06_01_0389 + 2779790-2779891,2780378-2781912,2782087-2782135,278... 27 5.4
05_02_0004 - 5528713-5528718,5529039-5529390,5529802-5530339,553... 27 5.4
12_02_1152 + 26515422-26515460,26516317-26516454,26518647-265188... 27 7.2
12_01_0064 - 553733-553821,554186-554277,554332-554360,554554-55... 27 7.2
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 27 7.2
06_03_0124 - 16942492-16945032,16945478-16945572,16945966-169460... 27 7.2
05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241 27 7.2
02_02_0655 - 12679230-12679676 27 7.2
01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036 27 7.2
11_06_0277 + 21843658-21845220,21846533-21846718,21847037-218471... 27 9.5
08_02_1119 - 24436942-24437565,24438380-24438502,24439264-24439626 27 9.5
05_01_0495 - 4136871-4136906,4137043-4137171,4137545-4137694,413... 27 9.5
>09_06_0016 -
20240358-20240797,20241040-20241131,20241132-20241250,
20241398-20241561,20241664-20241757,20242048-20242080,
20242361-20242478,20242712-20242812,20242882-20242962,
20243138-20243335,20243411-20243545,20243662-20243667,
20243727-20243805,20243845-20243896,20244328-20244388,
20244475-20244532,20245137-20245225,20246305-20246799
Length = 804
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/82 (25%), Positives = 44/82 (53%)
Frame = +3
Query: 165 SAQTHTVAIGLTKLLNATLKLSLDSDALKYLLQRSWEHLLATDSTGLTRTAQSISSASTA 344
+A HT ++G+ ++LN L + L +D ++Y+ QRS +++ + + +++S +A
Sbjct: 419 NAGVHTFSVGIPEVLNTNLMIELSADDIEYVYQRSSGKIISINISSF----EALSQVGSA 474
Query: 345 NPRILDCGGDSAFDELTSSCIS 410
+ + G A LT C+S
Sbjct: 475 RVKTKNIGRLEASYSLTFDCLS 496
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 34.3 bits (75), Expect = 0.047
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +3
Query: 165 SAQTHTVAIGLTKLLNATLKLSLDSDALKYLLQRSWEHLLATDSTGLTRTAQSISSASTA 344
+A HT ++G+T+ LN L + L +D ++Y+ QRS ++ T +++S A
Sbjct: 281 NAGAHTFSVGVTEDLNTNLLIELMADDIEYVYQRSPAKIIDI----RVPTFEALSQVGIA 336
Query: 345 NPRILDCGGDSAFDELTSSCIS 410
N + G + LT C S
Sbjct: 337 NVTTKNIGKLESSYSLTFKCSS 358
>08_02_1527 -
27664106-27664171,27664357-27664524,27664893-27665168,
27665687-27665741,27666015-27666088
Length = 212
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 219 LKLSLDSDALKYLLQRSWEHLLATDSTGL---TRTAQSISSASTA 344
L+L +A + L+ SW+HLL D + A ++SSA+TA
Sbjct: 76 LQLLSSQEASLFFLETSWDHLLELDMVAICFGKSFAAAVSSAATA 120
>10_01_0293 + 3039945-3040857,3042457-3042630,3043562-3044556
Length = 693
Score = 29.1 bits (62), Expect = 1.8
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Frame = +2
Query: 68 GYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAEAFLGFR-- 241
GY + D+S C N NG GY C +G +P + + ECD +
Sbjct: 264 GYACMSDNSECV---NSTNGPGYYCKCKQGYDGNPYVDKDQGCKDINECDVSNKKKYPCY 320
Query: 242 --CPEVPTSKELGAPAGYRF 295
C +P E GY++
Sbjct: 321 GVCNNIPGDYECHCRVGYQW 340
>01_03_0127 +
12787664-12787907,12790660-12790715,12792203-12792473,
12792600-12792832
Length = 267
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 41 PTELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAF 166
P+ C + F GDS+ +G G+GY F PEG AF
Sbjct: 24 PSASCARRPVVFAFGDSNTDTG--GIAAGMGYYFPLPEGRAF 63
>03_05_0222 +
22082863-22082938,22083261-22083333,22083451-22083496,
22083639-22083753,22083847-22083926,22084022-22084621,
22084718-22084822,22084916-22085248
Length = 475
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 151 WTYEVIADTVYAVSEAAAIARITDAEVSELVRTQFSWLSRLQGG 20
WT+ A V V++ + +TDA+ E +R + S+L L+GG
Sbjct: 188 WTHNTRAAAVMRVTDEGTGSAVTDADRLERIRDRLSYL--LRGG 229
>02_01_0607 -
4549248-4549290,4550193-4550337,4550438-4551185,
4551504-4551980,4552066-4552374
Length = 573
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 107 FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAEAFLGFRCPEVPTSKE 268
F+NC G+G+D + + FSP+ W + + C+ G +C V K+
Sbjct: 75 FKNCATGLGWD-EAKQTIVFSPEW----WEEHLDRCNNRE-KGIKCDHVKFRKQ 122
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 442 SSSGHSGTWSADIHEEVSSSNAESPPQSRIR--GLAVDADEILWAVRVRP 299
S++ SG S D+ EEV S N+E P S +++ + ILW + P
Sbjct: 149 SAAEISGGKSIDVDEEVLSGNSEKPSDSCTSEDPISIGKELILWRKPLEP 198
>02_04_0241 - 21203528-21204040
Length = 170
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 324 ISSASTANPRILDCGG-DSAFDELTSSCISAD 416
+S+A++A PR L+ GG D FDE+ S + A+
Sbjct: 103 VSAAASAAPRRLELGGGDGEFDEMESPRLWAE 134
>06_01_0389 +
2779790-2779891,2780378-2781912,2782087-2782135,
2782620-2782683,2782755-2782843
Length = 612
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 345 NPRILDCGGDSAFDELTSSC 404
NPR DC GD A L +SC
Sbjct: 107 NPRFSDCVGDDALLSLATSC 126
>05_02_0004 -
5528713-5528718,5529039-5529390,5529802-5530339,
5530354-5531731,5531895-5532015,5534226-5534545
Length = 904
Score = 27.5 bits (58), Expect = 5.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 201 WSGQSQRYVSGLNARPSGHTKS*PTP 124
W G+ R G ARPS T S PTP
Sbjct: 62 WRGEHSRGALGGGARPSPLTSSRPTP 87
>12_02_1152 +
26515422-26515460,26516317-26516454,26518647-26518809,
26519165-26519213,26519315-26519390,26520348-26520473
Length = 196
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 282 AGAPN-SFEVGTSGHRNPRKASASHSATWSGQSQRYVSGLNARPSGHTKS*PTPFTQFLK 106
+G P F +S + +A+ ++S Q+Q+ L+ARP + P+ + +F+K
Sbjct: 71 SGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQALHARPPEKRQRVPSAYNRFIK 130
>12_01_0064 -
553733-553821,554186-554277,554332-554360,554554-554958,
555046-555333,555412-555499,556428-556626,556738-556876,
556991-557041
Length = 459
Score = 27.1 bits (57), Expect = 7.2
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = -3
Query: 307 VRPVESVASRCSQLL*SRYFRASE---SKESFSVAFSNLVRPIATV-CVWAECKTFWTYE 140
V P+ + + CSQLL +RY S+ +++ V S +VRP + W + E
Sbjct: 323 VMPLSAAMAACSQLLVARYGEKSDGLVTRKDAEVPGSVVVRPERKLDHAWMVYSSL--NE 380
Query: 139 VIADTVYAVSEAAAIARITDAEVSELVRTQFSWLSRLQGGTFQT 8
D S+ I+ ++ ++ +LV + SW S Q G T
Sbjct: 381 EPRDQA-DTSQKLHISTESERKLYDLVVSHVSWYSPSQSGDSST 423
>10_08_0608 + 19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -1
Query: 441 VPQGIPVLGRQIYTKRLVHRTLNHHRNPEFGDWLSTQMKYFGQFVSD 301
+P G+P H+ LN H+ P+ +TQ+ G+ +S+
Sbjct: 1578 IPHGVPAKAATRLRTNQQHQQLNTHQKPQGDKETTTQILLAGETLSE 1624
>06_03_0124 -
16942492-16945032,16945478-16945572,16945966-16946076,
16946142-16946229
Length = 944
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -3
Query: 445 LSSSGHSGTWSADIHEEVSSSNAESPPQSRIRGLAVDADEILWAVRVRPVESVAS 281
L S G S W+A+I + ++++ + + L DA LW P +++ S
Sbjct: 236 LQSGGGSNVWAANISGKGTATSMQLLDSGNLVVLGKDASSPLWQSFSHPTDTLLS 290
>05_04_0194 + 18949268-18951514,18952063-18952215,18952304-18954241
Length = 1445
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 123 FTQFLKPLQLLESPMRKYPNW 61
F+QF++PL+L++ +RK W
Sbjct: 1245 FSQFIQPLELIKEHLRKIFKW 1265
>02_02_0655 - 12679230-12679676
Length = 148
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 454 AWILSSSGHSGTWSADIHEEVSSSNAESP--PQSRIRGLAVDADEILWA 314
A + S+SG S +W + I + AE P +RG + +++ WA
Sbjct: 8 ALVASASGRSPSWGSAISQSFRQVEAEDPFRRAQSMRGHDEEEEDLRWA 56
>01_01_1169 + 9313135-9313332,9313496-9314229,9314933-9317036
Length = 1011
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 379 AESPPQSRIRGLAVDADEILWAVRVRPVESVASRCS-QLL*SRYF 248
A P SR +A++ DEIL + + + + + CS L RYF
Sbjct: 269 ARDPRCSRKEIMAMEKDEILRGIETKDIPQLLAHCSTHLSDKRYF 313
>11_06_0277 +
21843658-21845220,21846533-21846718,21847037-21847165,
21847256-21847415,21847846-21847955,21848038-21848247,
21848473-21848730,21848810-21848885,21849217-21849350,
21849928-21850007,21850265-21850316
Length = 985
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 394 VSSSNAESPPQSRIRGLAV-DADEILWAVRVRPVESVASRCSQL 266
VS PP SR R A+ D D+ +W+ VE + + C+++
Sbjct: 176 VSHRATVPPPPSRSRRSALPDTDDEVWSFLTVRVEDLTAHCAKI 219
>08_02_1119 - 24436942-24437565,24438380-24438502,24439264-24439626
Length = 369
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 179 YRCDWPDQVAECDAEAFLGF 238
++CDW + C + FLGF
Sbjct: 166 FQCDWHSILKMCQVQGFLGF 185
>05_01_0495 -
4136871-4136906,4137043-4137171,4137545-4137694,
4137782-4137847,4138124-4138168,4139022-4139102,
4139202-4139283,4139571-4139642,4140473-4140573,
4140690-4140806,4140929-4141249
Length = 399
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 328 HLRRQPIPEFW 360
H RR+P+PEFW
Sbjct: 256 HCRRRPLPEFW 266
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,604,070
Number of Sequences: 37544
Number of extensions: 290908
Number of successful extensions: 999
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -