Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M22
(456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 53 9e-08
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 51 5e-07
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 51 5e-07
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 47 6e-06
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 47 6e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 40 0.001
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.011
U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,... 29 1.6
Z74034-2|CAE17843.1| 323|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 2.8
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 28 3.7
AY241928-1|AAO85277.1| 806|Caenorhabditis elegans xylosyltransf... 28 3.7
AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide O-xyl... 28 3.7
AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulv... 28 3.7
Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 27 4.9
AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D sp... 27 4.9
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 27 4.9
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 27 4.9
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 27 4.9
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 27 4.9
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 27 4.9
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 27 4.9
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 27 4.9
AF016438-1|AAB65895.1| 406|Caenorhabditis elegans Nuclear hormo... 27 4.9
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 27 4.9
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 27 8.6
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 53.2 bits (122), Expect = 9e-08
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +2
Query: 68 GYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPD 199
G+F G S+C F CVNG+ Y+F CP GL+F DT CD PD
Sbjct: 570 GFF--GVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 35 AQPTELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRC 187
A T +C + F +S+NC F C++ Y CP GL +S C
Sbjct: 475 ASNTNVCSGKSDGF-YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/67 (43%), Positives = 32/67 (47%)
Frame = +2
Query: 14 ERSALQPAQPTELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDW 193
E + L QPT C GYF G S S F C NG CP GL FS T RCD+
Sbjct: 298 ECAGLPTPQPT--CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Query: 194 PDQVAEC 214
V+EC
Sbjct: 353 ESNVSEC 359
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 98 CS-GFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
CS F C G+ CP L F+P CDWP VAEC
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 30.3 bits (65), Expect = 0.69
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 113 NCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
+C NG F CP L F+ + CD+P +C
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +2
Query: 107 FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECD 217
F C G+ CP L ++ CDW V C+
Sbjct: 41 FLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = +2
Query: 116 CVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
C CP L + D+ +C W V EC
Sbjct: 158 CTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/67 (43%), Positives = 32/67 (47%)
Frame = +2
Query: 14 ERSALQPAQPTELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDW 193
E + L QPT C GYF G S S F C NG CP GL FS T RCD+
Sbjct: 298 ECAGLPTPQPT--CEED-GYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDY 352
Query: 194 PDQVAEC 214
V+EC
Sbjct: 353 ESNVSEC 359
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 98 CS-GFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
CS F C G+ CP L F+P CDWP VAEC
Sbjct: 260 CSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
Score = 30.3 bits (65), Expect = 0.69
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 113 NCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
+C NG F CP L F+ + CD+P +C
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +2
Query: 107 FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECD 217
F C G+ CP L ++ CDW V C+
Sbjct: 41 FLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 27.5 bits (58), Expect = 4.9
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = +2
Query: 116 CVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
C CP L + D+ +C W V EC
Sbjct: 158 CTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +2
Query: 29 QPAQPTELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVA 208
+ ++ + C GYF G S S F C NG+ CP+GL FS CD+ V
Sbjct: 231 EKSEKPQNCGEVDGYFSFGRCS--SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVD 288
Query: 209 ECDAEA 226
ECD E+
Sbjct: 289 ECDLES 294
Score = 44.4 bits (100), Expect = 4e-05
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 SNCSG-FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAEAFLGFRCPEV 253
S CS F +C G+ + CP L F+P CDWP V +C ++ C EV
Sbjct: 188 SECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEKPQNCGEV 242
Score = 33.9 bits (74), Expect = 0.056
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +2
Query: 107 FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAE 223
F CV+G CPE L + + CDW V EC E
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEE 80
Score = 33.5 bits (73), Expect = 0.075
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 113 NCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAEAFLGFRCPEVPT 259
+C NG F CP L F+ ++ CD+P+ +C E L R + T
Sbjct: 328 SCQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDALLIRDASIGT 376
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 80 IGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAEA 226
I D++NC F CV G CP G F+P CDWP V C +A
Sbjct: 1252 IADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
Score = 34.7 bits (76), Expect = 0.032
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 95 NCSGFRNCVNGVGYDFV-CPEGLAFSPDTYRCDWPDQVAECDAEAFLGFRCPE 250
+CS C G ++ C LAF+ T +CD+P +V+ C+ C E
Sbjct: 1195 DCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSE 1247
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 68 GYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAE 223
G F +G S + C NG C E L F+ T C + D+V EC ++
Sbjct: 698 GLFSLGCSQK---YIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 291 DSTGLTRT--AQSISSASTANPRILDCGGDSAFDELTSSCISADQVPEC 431
D++GL +Q S + CG F+E T C D+VPEC
Sbjct: 695 DASGLFSLGCSQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPEC 743
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 62 QFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRC 187
Q G + IG S+ F +CV G Y CP+ L F+ T C
Sbjct: 103 QDGIYSIGCSNQ---FISCVAGGAYMAKCPDSLVFNERTQDC 141
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 315 AQSISSASTANPRILDCGGDSAFDELTSSCISADQVPEC 431
+Q S + + +C G FDE + SC D+V +C
Sbjct: 798 SQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVFKC 836
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 107 FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
++NCVNG F+C GL FSP+ RC DQ+AEC
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 68 GYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
G++ G+ S+ + C NG CP LAF CD+ V EC
Sbjct: 220 GFYSFGECSD--HYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +2
Query: 44 TELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
T+ + G + IG S F C G+ CP L + P C++ V +C
Sbjct: 59 TDCSTKEDGLYAIGGCS--PQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 47.2 bits (107), Expect = 6e-06
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 107 FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
++NCVNG F+C GL FSP+ RC DQ+AEC
Sbjct: 541 YKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 68 GYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
G++ G+ S+ + C NG CP LAF CD+ V EC
Sbjct: 220 GFYSFGECSD--HYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +2
Query: 44 TELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
T+ + G + IG S F C G+ CP L + P C++ V +C
Sbjct: 59 TDCSTKEDGLYAIGGCS--PQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +2
Query: 17 RSALQPAQPTELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCD 190
++ L P P CP G + +G SS + CVN V Y+ CPEGL F RC+
Sbjct: 33 KNVLNPKGPP--CPDGDGLYAVGCSSK---YLQCVNNVEYEQSCPEGLYFDRLLARCE 85
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +2
Query: 68 GYFRIGDSSNCSG-FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDA--EAFLGF 238
G D+ CS F C NG + CPE L + D CD+P+ V +C + +
Sbjct: 207 GDMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDCPEYNGSETSY 266
Query: 239 RCPEVPTS 262
R P+ TS
Sbjct: 267 RAPKTTTS 274
Score = 33.9 bits (74), Expect = 0.056
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 SSNCSGFR-NCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAECDAEAFLGFRCPEVPT 259
S+ CS + +C++ CP L FS ++ +C +P EC L P VP+
Sbjct: 964 SAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPS 1021
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Frame = +2
Query: 44 TELCPHQFGYFRIGDSSNCSG-----FRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVA 208
T + F + D ++ SG F C NG CP L F+P CD+ V
Sbjct: 565 TTIALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNPYVGECDYSTNVR 624
Query: 209 EC 214
+C
Sbjct: 625 DC 626
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 95 NCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
+C+ F +N CP GL +S RCD+ + V +C
Sbjct: 806 SCNNFETTINR------CPAGLFYSKLNNRCDYKEHVEDC 839
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 86 DSSNCS-GFRNCVNGVGYDFVCPEGLAFSPDTYRCDW 193
D + C+ + C NG+ Y CP + P RCD+
Sbjct: 123 DKTVCNENYYQCANGISYMRKCPYQQVYVPILKRCDY 159
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 116 CVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
C N + F CP GL +S +CD + V C
Sbjct: 708 CYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGC 740
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 53 CPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDW 193
C ++ G F I + + F +C NGVG C + L F C++
Sbjct: 353 CKNRDGIFGIKECH--ASFLSCDNGVGRVIQCADNLVFDTRVSACEF 397
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.011
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 140 FVCPEGLAFSPDTYRCDWPDQVAEC 214
F+C GL FSP+ RC DQ+AEC
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +2
Query: 44 TELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCDWPDQVAEC 214
T+ + G + IG S F C G+ CP L + P C++ V +C
Sbjct: 59 TDCSTKEDGLYAIGGCS--PQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>U41749-1|AAB52488.2| 248|Caenorhabditis elegans Dehydrogenases,
short chain protein25 protein.
Length = 248
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 177 HTVAIGLTKLLNATLKLSLDSDALKYLLQRSWEHLLATDSTGLTRTAQSISSASTAN 347
H ++G +L ++ DS LK + Q W+ ++ + TG+ +Q+ AS N
Sbjct: 76 HVKSLGTPSILVNCAGITKDSTLLK-MKQEQWDSVIKVNLTGVFHVSQAFVKASVDN 131
>Z74034-2|CAE17843.1| 323|Caenorhabditis elegans Hypothetical
protein F43A11.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 2.8
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -3
Query: 337 DADEILW-AVRVRPVESVAS-RCSQLL*SRYFRASESKESFSVAFSNLVRPIATVCVWAE 164
DAD + W A V + V C+ L+ + + R+ + SF++ S + +W
Sbjct: 6 DADPLNWFAASVMTINGVFGITCNTLIIASFIRSPTERTSFNLICSYRAVGNCIILLWGF 65
Query: 163 CKTFWTYEVIADTVY 119
TF + DT++
Sbjct: 66 LGTFVPITLFGDTLF 80
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +2
Query: 89 SSNCSGFRNCVNGVGYDFVC---PEGLAFSPDTYRCDWPDQ 202
+S C+GF+ VN G F C P AF+P+ C P++
Sbjct: 1161 TSCCTGFKKMVNITGRTFYCGPLPVVPAFNPEQTTCCDPEK 1201
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 27.9 bits (59), Expect = 3.7
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 10/114 (8%)
Frame = +2
Query: 47 ELCPHQFGYFRIGDSSNCSGFRNCVNGVGYDFV-----CPEGLAFSPDTYRC-DWPDQVA 208
E+CP+ D +C +N + FV CPEG SPD C + +
Sbjct: 19 EICPNTT--IPSDDMMSCKCSKNQIEIFRNGFVPTCEECPEGTLSSPDQTGCLNCNNGTC 76
Query: 209 ECDAEAFLGFR--CPEVPTSKELGAPAGYRFYRSDTN-CPK-YFICVDSQSPNS 358
C +++ L FR + T+ FYR+D C K C + S NS
Sbjct: 77 HCPSQSTLIFRDASGNLLTNDAFCGNCASGFYRNDNGYCTKCETSCSEMNSTNS 130
>AY241928-1|AAO85277.1| 806|Caenorhabditis elegans
xylosyltransferase protein.
Length = 806
Score = 27.9 bits (59), Expect = 3.7
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +3
Query: 192 GLTKLLNATLKLSLDSDALKYLLQRSWEHLLATDSTGLTRTAQSISSASTANPRILDCGG 371
G TK + + +SL YLL + +H G ++ S S T+NP + C
Sbjct: 5 GTTKYRDYAIVISLFFLLNVYLLYNTAQHT----QVGNSKHISSDSGEKTSNP-LPSC-- 57
Query: 372 DSAFDELTSSCISADQVPECPEELRIHA 455
D+L S IS P C +L++ A
Sbjct: 58 -EITDDLAKSAISRAITPSCKAKLQLEA 84
>AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide
O-xylosyltransferase protein.
Length = 806
Score = 27.9 bits (59), Expect = 3.7
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +3
Query: 192 GLTKLLNATLKLSLDSDALKYLLQRSWEHLLATDSTGLTRTAQSISSASTANPRILDCGG 371
G TK + + +SL YLL + +H G ++ S S T+NP + C
Sbjct: 5 GTTKYRDYAIVISLFFLLNVYLLYNTAQHT----QVGNSKHISSDSGEKTSNP-LPSC-- 57
Query: 372 DSAFDELTSSCISADQVPECPEELRIHA 455
D+L S IS P C +L++ A
Sbjct: 58 -EITDDLAKSAISRAITPSCKAKLQLEA 84
>AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulva
protein 6 protein.
Length = 806
Score = 27.9 bits (59), Expect = 3.7
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +3
Query: 192 GLTKLLNATLKLSLDSDALKYLLQRSWEHLLATDSTGLTRTAQSISSASTANPRILDCGG 371
G TK + + +SL YLL + +H G ++ S S T+NP + C
Sbjct: 5 GTTKYRDYAIVISLFFLLNVYLLYNTAQHT----QVGNSKHISSDSGEKTSNP-LPSC-- 57
Query: 372 DSAFDELTSSCISADQVPECPEELRIHA 455
D+L S IS P C +L++ A
Sbjct: 58 -EITDDLAKSAISRAITPSCKAKLQLEA 84
>Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 487 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 518
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 487 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 518
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D
splice variant protein.
Length = 728
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 487 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 518
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 348 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 379
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -1
Query: 261 EVGTSGHRNPRKASASHSATWSG------QSQRYVSGLNARPSGHTKS*PTPFTQFLKPL 100
E G +GH N + S ++ WSG Q ++ +G N RP+ + S + +++ P
Sbjct: 523 ENGENGHHNHYQNGQSSNSWWSGNDGQTRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSP- 581
Query: 99 QLLESP 82
+E+P
Sbjct: 582 DAVETP 587
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.5 bits (58), Expect = 4.9
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = -1
Query: 261 EVGTSGHRNPRKASASHSATWSG------QSQRYVSGLNARPSGHTKS*PTPFTQFLKPL 100
E G +GH N + S ++ WSG Q ++ +G N RP+ + S + +++ P
Sbjct: 425 ENGENGHHNHYQNGQSSNSWWSGNDGQTRQRKQQHNGYNNRPTVSSSSSSSTSSKYFSP- 483
Query: 99 QLLESP 82
+E+P
Sbjct: 484 DAVETP 489
>AF016438-1|AAB65895.1| 406|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 133 protein.
Length = 406
Score = 27.5 bits (58), Expect = 4.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +2
Query: 23 ALQPAQPTELC--PHQFGYFRIGDSSNCSGF--RNCVNGVGY-DFVCPEGLAFSPDTYRC 187
AL + P E+C P +F + C+ F R + Y D VC +G D YRC
Sbjct: 4 ALYLSGPCEICEQPAHGNHFGVLSCRACAAFFRRAALQNAKYQDRVCRKGNCIGNDLYRC 63
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 110 RNCVNGVG-YDFVCPEGLAFSPDTYRCDWPDQ 202
+ CVN G Y +C G A PD +C+ D+
Sbjct: 448 QKCVNIPGSYQCICDRGFALGPDGTKCEDIDE 479
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +2
Query: 86 DSSNCSGFRNCVNGVGYDFVCPEGLAFSPDTYRCD 190
D NC F C +G+ C EG + CD
Sbjct: 168 DVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTCD 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,198,890
Number of Sequences: 27780
Number of extensions: 237591
Number of successful extensions: 890
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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