Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M22
         (456 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.68 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   0.68 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   4.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   4.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   6.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 369  HRNPEFGDWLSTQM 328
            H  PEFGDW + Q+
Sbjct: 1402 HYKPEFGDWDTAQI 1415



 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 439  SSGHSGTWSADIHEEVSSSNAESPPQSRIRGLAVDADEIL 320
            +SG  G  SA IH +      E+P    I+ L + ++ IL
Sbjct: 1160 TSGGDGVKSAPIHCQTEQDAPEAP--IAIKALVMSSESIL 1197


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 86  DSSNCSGFRNCVNGVGYDFV 145
           DS N  GF   V G+GYDF+
Sbjct: 251 DSQNEVGFYE-VEGIGYDFI 269


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -2

Query: 254 VLQGIGIQGKLQRRIQ 207
           VLQG+G+QG +Q+ +Q
Sbjct: 831 VLQGLGVQG-VQQGVQ 845


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 132 PTPFTQFLKPLQLLESPMRKYPNW*GHS 49
           P   T   K  +     +R YPNW  H+
Sbjct: 211 PVTLTTVPKHSKTKSPKLRPYPNWEWHT 238


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +2

Query: 146 CPEGLAFSPDTYRCDWPDQVAECDAE 223
           CP+GL    D   C   D +   D +
Sbjct: 64  CPDGLKLLSDGLMCVEKDSIHSIDGD 89


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 261 EVGTSGHRNPRKASASHSATWS 196
           E  +S   NPR ASA  S+T S
Sbjct: 506 ETNSSPSPNPRIASAPSSSTSS 527


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,299
Number of Sequences: 438
Number of extensions: 2829
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)