Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M21
         (545 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    50   3e-05
UniRef50_A7SBJ1 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.61 
UniRef50_Q88M74 Cluster: Acyltransferase; n=36; Proteobacteria|R...    33   3.3  
UniRef50_Q8TXS5 Cluster: Uncharacterized protein; n=1; Methanopy...    33   4.3  
UniRef50_P54741 Cluster: Serine/threonine-protein kinase afsK; n...    33   4.3  
UniRef50_Q6FV58 Cluster: Similarity; n=1; Candida glabrata|Rep: ...    33   5.7  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = -1

Query: 359  VYSHILEAK*SRTVRFQESFIP*TIRVWTELPVAVFPREY 240
            V+ + LE   S TVRFQ SF+P TIR+W ELP  VFP  Y
Sbjct: 915  VHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERY 954


>UniRef50_A7SBJ1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 100

 Score = 35.9 bits (79), Expect = 0.61
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 162 YCRRTYTTVTAYHLFATLAS*KPSRHPSSILLPPDVHYVTLNRSP 28
           YC + YTT+    +  T     P  HP+S +LPP +H+    + P
Sbjct: 14  YCHQAYTTLPP-SILHTATQHLPYCHPASTILPPSIHHTATQQPP 57


>UniRef50_Q88M74 Cluster: Acyltransferase; n=36; Proteobacteria|Rep:
           Acyltransferase - Pseudomonas putida (strain KT2440)
          Length = 661

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -1

Query: 284 RVWTELPVAVFPREYQGIWGS--SKGA*KGFLKS-WQR 180
           R+  E PV V P   QG+WGS  S+   KGF K  W R
Sbjct: 593 RILEETPVPVIPLALQGLWGSFFSRDPAKGFFKRLWSR 630


>UniRef50_Q8TXS5 Cluster: Uncharacterized protein; n=1; Methanopyrus
           kandleri|Rep: Uncharacterized protein - Methanopyrus
           kandleri
          Length = 428

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 55  DVGGKEYGRGVSGWFL*R*SGKEMVSGHRSICTPAISEVSC 177
           +V G+EYG+ +S WF     G+  ++ HR   +PA+S++SC
Sbjct: 299 EVYGREYGKWLSRWFK---RGRRWLNFHRP--SPALSDISC 334


>UniRef50_P54741 Cluster: Serine/threonine-protein kinase afsK; n=3;
           Actinomycetales|Rep: Serine/threonine-protein kinase
           afsK - Streptomyces coelicolor
          Length = 799

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 23/77 (29%), Positives = 36/77 (46%)
 Frame = +2

Query: 140 VVYVRLQYPRYHARVANSLKNLFTLLLKNPKFPGIPWETRPLGAQSIPGSFTG*NSPETG 319
           +V+    +P +H   AN ++ +F LL + P   G+P E RPL    +    TG  +P   
Sbjct: 204 LVFAATGHPPFHG--ANPVETVFMLLREGPDLEGLPDELRPLIESCMQMEATGRPNP-AD 260

Query: 320 LSGTI*PPKCGSKLQNS 370
           L   + P   GS   +S
Sbjct: 261 LQAQLAPHLFGSGSDDS 277


>UniRef50_Q6FV58 Cluster: Similarity; n=1; Candida glabrata|Rep:
           Similarity - Candida glabrata (Yeast) (Torulopsis
           glabrata)
          Length = 240

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 273 SPYPDRSRDETLLKPDCPGLFSLQN 347
           S Y  R RDETL KPDC G+   +N
Sbjct: 61  SDYSYRPRDETLKKPDCDGILDNKN 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,800,933
Number of Sequences: 1657284
Number of extensions: 14300944
Number of successful extensions: 33807
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33797
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)