Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M21
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.2  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 348 VGVNSKTPCRWRAVPW 395
           +  N+K PC W A PW
Sbjct: 294 IDANTK-PCTWAARPW 308


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 348 VGVNSKTPCRWRAVPW 395
           +  N+K PC W A PW
Sbjct: 294 IDANTK-PCTWAARPW 308


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 348 VGVNSKTPCRWRAVPW 395
           +  N+K PC W A PW
Sbjct: 294 IDANTK-PCTWAARPW 308


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 230 KFPGIPWETRPLGAQSIPGSF 292
           K P +P   RP+   + P SF
Sbjct: 647 KMPSMPLLPRPISCHTTPDSF 667


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 91   QTPLVHTPSPRRPLRYT*P 35
            Q P++  PSP +  RYT P
Sbjct: 982  QQPIMTDPSPFKRGRYTPP 1000


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,169
Number of Sequences: 438
Number of extensions: 4208
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)