Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M20
(183 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 20 3.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 19 5.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 19 5.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 19 5.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 19 5.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 19 5.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 19 5.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 19 5.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 19 5.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 5.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 5.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 5.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 7.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 18 9.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 18 9.5
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 18 9.5
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 19.8 bits (39), Expect = 3.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -2
Query: 125 DISNYNISVSWQSSSCLPGYLRNMKRHQ*CDRLYSSV 15
D+S++ +SV W +P RN + + C YS +
Sbjct: 205 DLSDFYLSVEWDILE-VPA-SRNEEYYPCCTEPYSDI 239
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 165 DPPRGLRSRTRSTR 124
D GLRSRT+ R
Sbjct: 22 DSETGLRSRTQEER 35
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 5.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 122 ISNYNISVSWQSSSCLPGYLRNMKRHQ*C 36
I + N + + S SC PG + K Q C
Sbjct: 520 IKSENEAADFFSGSCAPGAPLDSKLCQQC 548
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 5.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 122 ISNYNISVSWQSSSCLPGYLRNMKRHQ*C 36
I + N + + S SC PG + K Q C
Sbjct: 520 IKSENEAADFFSGSCAPGAPLDSKLCQQC 548
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 5.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 122 ISNYNISVSWQSSSCLPGYLRNMKRHQ*C 36
I + N + + S SC PG + K Q C
Sbjct: 520 IKSENEAADFFSGSCAPGAPLDSKLCQQC 548
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 6/9 (66%)
Frame = -1
Query: 183 PPATLPDPP 157
PP T P PP
Sbjct: 293 PPETQPTPP 301
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 74 PGYLRNMKRHQ*CDRLY 24
PGY++ +HQ D+ +
Sbjct: 114 PGYVQPPTKHQKLDQKF 130
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 153 GLRSRTRSTRHQQL 112
GL+ TRS HQ +
Sbjct: 239 GLQKYTRSFAHQSI 252
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 153 GLRSRTRSTRHQQL 112
GL+ TRS HQ +
Sbjct: 234 GLQKYTRSFAHQSI 247
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,038
Number of Sequences: 438
Number of extensions: 728
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 40
effective length of database: 128,823
effective search space used: 2576460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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