Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M19
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0221 + 1671231-1671349,1671613-1671745,1672011-1672190,167... 142 1e-34
11_01_0220 + 1717861-1717979,1718149-1718281,1718544-1718723,171... 141 3e-34
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 141 3e-34
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317... 31 0.72
06_02_0322 + 14369221-14369540,14370240-14370918,14371347-143715... 29 1.7
04_03_0768 - 19396146-19396607,19397855-19398175,19398424-193995... 27 6.7
11_06_0708 + 26475306-26478404 27 8.8
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 27 8.8
08_02_0902 - 22408895-22409620,22410190-22410326,22410550-224106... 27 8.8
>12_01_0221 +
1671231-1671349,1671613-1671745,1672011-1672190,
1672632-1672712,1672850-1673013,1673109-1673245,
1673492-1673607,1673725-1673958
Length = 387
Score = 142 bits (345), Expect = 1e-34
Identities = 63/121 (52%), Positives = 89/121 (73%)
Frame = +3
Query: 147 IRIYEVGPRDGLQNESKFVPTDIKIELINKLVQAGLKNIESASFVSPKWMKQMSDGVEVM 326
++I EVGPRDGLQNE VPT +KIELI+KLV +GL +E+ SFVSPKW+ Q++D +V+
Sbjct: 93 VKIVEVGPRDGLQNEKNTVPTSVKIELIHKLVASGLSVVEATSFVSPKWVPQLADAKDVV 152
Query: 327 KNLPKVHNVNYPVLVPNLKGYSIAKQCNVEEVAIFPAGSEGFSQKNLNCSVEEGLRRFTD 506
+ + V +V +PVL PNL+G+ A +EVA+F + SE FS+ NLNC+++E L R+ D
Sbjct: 153 EGIKHVPDVRFPVLTPNLRGFEAAVAAGAKEVAVFASASESFSKSNLNCTIKESLVRYHD 212
Query: 507 V 509
V
Sbjct: 213 V 213
>11_01_0220 +
1717861-1717979,1718149-1718281,1718544-1718723,
1719046-1719126,1719259-1719422,1719518-1719654,
1719900-1720015,1720134-1720367
Length = 387
Score = 141 bits (341), Expect = 3e-34
Identities = 62/121 (51%), Positives = 88/121 (72%)
Frame = +3
Query: 147 IRIYEVGPRDGLQNESKFVPTDIKIELINKLVQAGLKNIESASFVSPKWMKQMSDGVEVM 326
++I EVGPRDGLQNE VP +KIELI+KLV +GL +E+ SFVSPKW+ Q++D +V+
Sbjct: 93 VKIVEVGPRDGLQNEKSTVPASVKIELIHKLVASGLSVVEATSFVSPKWVPQLADAKDVL 152
Query: 327 KNLPKVHNVNYPVLVPNLKGYSIAKQCNVEEVAIFPAGSEGFSQKNLNCSVEEGLRRFTD 506
+ + V +V +PVL PNL+G+ A +EVA+F + SE FS+ NLNC+++E L R+ D
Sbjct: 153 QGIRHVPDVRFPVLTPNLRGFEAALAAGAKEVAVFASASESFSKSNLNCTIKESLVRYRD 212
Query: 507 V 509
V
Sbjct: 213 V 213
>01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 141 bits (341), Expect = 3e-34
Identities = 62/122 (50%), Positives = 86/122 (70%)
Frame = +3
Query: 147 IRIYEVGPRDGLQNESKFVPTDIKIELINKLVQAGLKNIESASFVSPKWMKQMSDGVEVM 326
++I EVGPRDGLQNE VPT +KIELI +L +GL +E+ SFVSPKW+ Q++D +VM
Sbjct: 758 VKIVEVGPRDGLQNEKNIVPTHVKIELIQRLATSGLSVVEATSFVSPKWVPQLADAKDVM 817
Query: 327 KNLPKVHNVNYPVLVPNLKGYSIAKQCNVEEVAIFPAGSEGFSQKNLNCSVEEGLRRFTD 506
+ + V+ PVL PNLKG+ A +EVA+F + SE FS+ N+NC+++E L R+ D
Sbjct: 818 DVVRNIEGVSLPVLTPNLKGFEAAVAAGAKEVAVFASASEAFSKSNINCTIKESLARYKD 877
Query: 507 VA 512
VA
Sbjct: 878 VA 879
>02_03_0065 -
14629676-14629804,14631119-14631247,14631383-14631736,
14631817-14632063,14632155-14632231,14632574-14632648,
14632721-14632822,14632966-14633084,14633538-14633627,
14634866-14635022,14635085-14635098,14635425-14635548,
14635628-14635678,14635793-14635891,14636962-14637072
Length = 625
Score = 30.7 bits (66), Expect = 0.72
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 198 FVPTDIKIELINKLVQAGLKNIESASFVSPKWMK 299
F PTD+K +I LV+ K++ES P W+K
Sbjct: 31 FQPTDVKDPVIRPLVELDTKSLESMLPEVPHWVK 64
>06_02_0322 +
14369221-14369540,14370240-14370918,14371347-14371573,
14372121-14372312,14372394-14372550,14373860-14374093
Length = 602
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +3
Query: 99 IRSISNLKHMSTSVPDIRIYEVGPRDGLQNESKFVPTDIKIELINKLVQAGLKNIESASF 278
+R I +K + VP+ YE+ P + P D E+IN L++ LKN+ES
Sbjct: 492 VRPIWGIK-VKQQVPESPYYEISP-------AGHCPHDEVPEVINYLLRGWLKNVESEGS 543
Query: 279 VSPKWMKQMS 308
V+ ++++ S
Sbjct: 544 VAVPFLEEPS 553
>04_03_0768 -
19396146-19396607,19397855-19398175,19398424-19399569,
19400073-19400855,19402114-19402149
Length = 915
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 KNIESASFVSPKWMKQMSDGVE--VMKNLPKVHNVNYPVLVPNLKGYSIAKQCNVEEVAI 428
++ E F M M G+ V++++ + N PV VPN +G I + V
Sbjct: 244 RDFEERGFCLRGDMCPMEHGLNRIVVEDMQSLSQFNLPVTVPNTQGLGIQNEPGTAPVNT 303
Query: 429 FP-AGSEGFSQKNLNCSV 479
GS+G K++ +V
Sbjct: 304 SSLGGSKGVPAKDIKSAV 321
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 252 LKNIESASFVSPKWMKQMSDGVEVMKNLPKVHN--VNYPVLVPNLK 383
LK +E F+S Q G+E++ NLP+V VN+ PNL+
Sbjct: 942 LKMVEHLPFLSGILFVQSCQGLEIISNLPQVRELLVNH---CPNLR 984
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 252 LKNIESASFVSPKWMKQMSDGVEVMKNLPKVHN--VNYPVLVPNLK 383
LK +E F+S Q G+E++ NLP+V VN+ PNL+
Sbjct: 758 LKMVEHLPFLSGILFVQSCQGLEIISNLPQVRELLVNH---CPNLR 800
>08_02_0902 -
22408895-22409620,22410190-22410326,22410550-22410685,
22410787-22411224
Length = 478
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 291 WMKQMSDGVEVMKNLPKVHNVNYPVLVPNLKGYSI 395
WM++M V K L +H+ + PV+ + K +I
Sbjct: 199 WMRRMQTAVGAAKGLAFLHDADTPVIYRDFKASNI 233
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,153,855
Number of Sequences: 37544
Number of extensions: 194580
Number of successful extensions: 444
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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