Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M19
(513 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 1.9
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 23 1.9
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 4.3
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 4.3
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 5.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 5.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 5.7
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 5.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 7.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.5
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 9.9
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 1.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 317 YTITHLLHPFWTDKACGFN 261
YTIT L+ +W D+ F+
Sbjct: 82 YTITMYLNQYWKDERLAFS 100
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 23.0 bits (47), Expect = 1.9
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 312 GVEVMKNLPKVHNVNYPVLVPN-LKGYSIAKQCN 410
GV+ + P +H + YP VP + Y+ +C+
Sbjct: 25 GVDECQATPVIHFLQYPGCVPKPIPSYACRGRCS 58
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 301 CFIHFGLTKLADSIFFNPAWTNLF 230
CFI G DS+FF T F
Sbjct: 48 CFIDAGSCLTPDSVFFKSHITEAF 71
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 301 CFIHFGLTKLADSIFFNPAWTNLF 230
CFI G DS+FF T F
Sbjct: 48 CFIDAGSCLTPDSVFFKSHITEAF 71
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 300 QMSDGVEVMKNLPKVHNVNYP 362
QM +++M+NLP+ +N P
Sbjct: 355 QMIVSMKIMENLPQSGRINDP 375
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 5.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 407 TLFGNAITL*VRHQNRIVDIVDLWK 333
T G+ ++L + + VD+ D WK
Sbjct: 173 TFNGDQVSLALYNNKNFVDLSDYWK 197
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 307 LICFIHFGLTKLADSIFFNPAWTNLFISSILISVG 203
++C++ F + L NP F+SS+ + +G
Sbjct: 382 IVCWLPFFVLALVRPFLKNPDAIPAFLSSLFLWLG 416
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 5.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 420 VAIFPAGSEGFSQKNLNCSVEEGLRRF 500
VA P S S+ ++ CS GLR F
Sbjct: 6 VAFLPVKSFRESRCSVRCSAASGLRWF 32
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +3
Query: 186 NESKFVPTDIKIELINKLVQAGLKNIE 266
NE +P D + ++++ +AG K ++
Sbjct: 1483 NEKLHIPKDKSVSVLSRENEAGQKEVK 1509
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 7.5
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 60 TMKQYTRIISLKAIRSISNLKHMSTSVPDIRIYEVGPRDGLQNESKFVPTDIKIELINKL 239
T++ T ++ K I S K++ V + +G + Q +++ P + +L+N
Sbjct: 1192 TVRMVTAQLAGKPIVLASGNKNVGVGVSNSGSVVLGKQQPSQQQTQQQPIILPSQLLNIK 1251
Query: 240 VQAGLKNI 263
GLK I
Sbjct: 1252 TLHGLKVI 1259
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 20.6 bits (41), Expect = 9.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 250 PAWTNLFISSILISVGTNL 194
P WT ISS++I N+
Sbjct: 45 PLWTGKQISSLIIPGNVNM 63
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,025
Number of Sequences: 438
Number of extensions: 2157
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -