Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M18
(466 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical ... 144 2e-35
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 30 0.71
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 30 0.71
AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical ... 29 2.2
AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical ... 29 2.2
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 28 2.9
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 28 2.9
Z66567-6|CAA91490.2| 281|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 27 6.6
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 6.6
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 8.8
U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical p... 27 8.8
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 8.8
>AF038609-3|AAU87825.1| 193|Caenorhabditis elegans Hypothetical
protein C54E4.5 protein.
Length = 193
Score = 144 bits (350), Expect = 2e-35
Identities = 64/119 (53%), Positives = 79/119 (66%)
Frame = +2
Query: 110 YTVDENDPIKMRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDES 289
Y V DPI++RVR Y+ H TVDFVK WLKF+H K I L L +DES
Sbjct: 19 YDVKAEDPIQVRVRTHYFTQHQKQTVDFVKEMHQKWLKFDHAKMPILGCLDMLATFLDES 78
Query: 290 DPDTNLPNIVHAFQTAERIREDHPDDDWFHLIGLIHDLGKVMAFYEEPQWCVVGDTFAV 466
DPD + N++HA+QTAE+IRE+HPD W HL GLIHDLGK+M+ + E QW V GDT+ V
Sbjct: 79 DPDVDEANLIHAYQTAEKIRENHPDKPWMHLAGLIHDLGKIMSVWGEEQWAVTGDTYPV 137
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 30.3 bits (65), Expect = 0.71
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 338 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 424
E ++ + DD W HL G+++D+ K + F+
Sbjct: 25 ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 53
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 30.3 bits (65), Expect = 0.71
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 338 ERIREDHPDDDWFHLIGLIHDLGKVMAFY 424
E ++ + DD W HL G+++D+ K + F+
Sbjct: 61 ELMKHNTKDDCWVHLFGIVYDVTKYLDFH 89
>AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical
protein Y34B4A.4b protein.
Length = 833
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = +2
Query: 140 MRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIV 319
M R+ + + +F M F F+S +KD K+ + ES D P
Sbjct: 216 MNARRGFDEDEEEENTNFGSSNMRGGDPFERFRSMLKDKDEKIEAIEGESSSDPGTPGSS 275
Query: 320 HAFQTAERIRE 352
+T ER E
Sbjct: 276 SKSKTIERTSE 286
>AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical
protein Y34B4A.4a protein.
Length = 877
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = +2
Query: 140 MRVRKTYYDMHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIV 319
M R+ + + +F M F F+S +KD K+ + ES D P
Sbjct: 216 MNARRGFDEDEEEENTNFGSSNMRGGDPFERFRSMLKDKDEKIEAIEGESSSDPGTPGSS 275
Query: 320 HAFQTAERIRE 352
+T ER E
Sbjct: 276 SKSKTIERTSE 286
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 457 CVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 296
C RLLVE H+ + S++VE I+V+ + TD L C E+ ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 457 CVTDHAPLRLLVEGHNLSEIVNESNEVEPIIVR-MVLTDPLRCLESVHNVRQVSV 296
C RLLVE H+ + S++VE I+V+ + TD L C E+ ++ V
Sbjct: 797 CTEQQRLARLLVELHSRRPL-EASSDVESIVVQSLTSTDDLVCSEAARTFHRIWV 850
>Z66567-6|CAA91490.2| 281|Caenorhabditis elegans Hypothetical
protein ZK455.5 protein.
Length = 281
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +2
Query: 212 NWL-KFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRED-HPDDDWFHLI 385
NWL H K +++ I D S PN+ +++ + D ++ L
Sbjct: 78 NWLCNTKHLKGVHENSYIVTLDEESSSALKKTWPNVNQVNIVVPGLKDSFNYGDGYYQLF 137
Query: 386 GLIH-DLGKVMAFYEEPQWCVVGDTF 460
L +L + + Y +P W + DTF
Sbjct: 138 YLFRANLARAILHYNKPFWMIQQDTF 163
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 206 MDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLI 385
+D W + K AL+ LNDL+ L N +++ + A R R D HLI
Sbjct: 505 IDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNR-----DVGKHLI 559
Query: 386 GLIHDLGK 409
G+ LGK
Sbjct: 560 GVEDLLGK 567
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 206 MDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLI 385
+D W + K AL+ LNDL+ L N +++ + A R R D HLI
Sbjct: 505 IDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNR-----DVGKHLI 559
Query: 386 GLIHDLGK 409
G+ LGK
Sbjct: 560 GVEDLLGK 567
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 326 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 466
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1602 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1651
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 326 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 466
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1599 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1648
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
T24B8.7b protein.
Length = 2923
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 326 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 466
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1602 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1651
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
T24B8.7a protein.
Length = 2920
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 326 FQTAERIREDHPDDDWFHL----IGLIHDLGKVMAFYEEPQWCVVGDTFAV 466
F++ R RED D DW L I +I D K + + +P++C + A+
Sbjct: 1599 FESPRRCREDQKDIDWSQLGHKPIEIIRDQIKSLLGF-KPRFCTTNNDLAL 1648
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 206 MDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIREDHPDDDWFHLI 385
+D W + K AL+ LNDL+ L N +++ + A R R D HLI
Sbjct: 505 IDRWTQLLTLLEQRKRALMSLNDLMSLLRDIDTLSNELYSLEPAVRNR-----DVGKHLI 559
Query: 386 GLIHDLGK 409
G+ LGK
Sbjct: 560 GVEDLLGK 567
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 173 TNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRE 352
T++ VD+ + + + +F S +K ++K+N P TN+ + FQ + +
Sbjct: 94 TDVDVDYEQEEFQSITNLKNFSSLVKPYILKVN-------PGTNVTKMYPLFQVKYKEFQ 146
Query: 353 DH 358
DH
Sbjct: 147 DH 148
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 173 TNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRE 352
T++ VD+ + + + +F S +K ++K+N P TN+ + FQ + +
Sbjct: 94 TDVDVDYEQEEFQSITNLKNFSSLVKPYILKVN-------PGTNVTKMYPLFQVKYKEFQ 146
Query: 353 DH 358
DH
Sbjct: 147 DH 148
>U64857-10|AAC25860.1| 265|Caenorhabditis elegans Hypothetical
protein C37C3.3 protein.
Length = 265
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 167 MHTNMTVDFVKGKMDNWLKFNHFKSTIKDALIK--LNDLVDESD 292
+H NM D V+ MDN + I DA+ N+ +DE+D
Sbjct: 165 VHNNMDSDQVRDMMDNIDEQREVAKEIADAISNPGFNNAIDEAD 208
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 173 TNMTVDFVKGKMDNWLKFNHFKSTIKDALIKLNDLVDESDPDTNLPNIVHAFQTAERIRE 352
T++ VD+ + + + +F S +K ++K+N P TN+ + FQ + +
Sbjct: 94 TDVDVDYEQEEFQSITNLKNFSSLVKPYILKVN-------PGTNVTKMYPLFQVKYKEFQ 146
Query: 353 DH 358
DH
Sbjct: 147 DH 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,480,680
Number of Sequences: 27780
Number of extensions: 239840
Number of successful extensions: 679
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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