Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M16
         (378 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20164| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.41 
SB_27915| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.8  
SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.8  
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)                     26   8.8  

>SB_20164| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 222

 Score = 30.7 bits (66), Expect = 0.41
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 70  YTSTMNNKLLNGNLWETDPELFNLI--TKEKKRQQAGLEM 183
           Y   +N KLL  +L   DPE +N +   KE   ++ GLEM
Sbjct: 124 YKRMLNKKLLMKDLETIDPEFYNSLVWVKENNIEECGLEM 163


>SB_27915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 429

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +1

Query: 4   KYRKKYIFFLYFQFSIPVRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEM 183
           K  +K   F+   F + +R + Y  T   ++LN N+        + I+  K R ++ +EM
Sbjct: 325 KNTRKIFKFVDLPFPVDMRQWLYNRTHFKEVLNSNIGTFSTRKNSTISMRKWRLKSPVEM 384

Query: 184 IA 189
           ++
Sbjct: 385 VS 386


>SB_12905| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 264

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
 Frame = +1

Query: 1   CKY-RKKYIFF--LYFQFSIPVRN-------FNYTSTMNNKLLNGNLWETDPELFNL 141
           CK+ R ++ F+   Y  + I +RN       F  T   +++ L GN W  DPE +N+
Sbjct: 136 CKFIRDRFPFYRETYPSWKICIRNNLSLNDCFIKTGIKSDEPLKGNYWTLDPESYNM 192


>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
          Length = 2478

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +1

Query: 76   STMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQ 222
            ST  N+L+       DP+ +  +T+EKK+ Q  +  + SE+  S  +L+
Sbjct: 1259 STKTNQLME-QYRNVDPDEYKRMTEEKKQFQQHVASLKSESQRSKTLLE 1306


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,438,138
Number of Sequences: 59808
Number of extensions: 217707
Number of successful extensions: 453
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)