Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M16
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 125 1e-29
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 125 1e-29
U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical pr... 30 0.48
U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthas... 30 0.48
U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w... 30 0.48
U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine rece... 28 1.9
AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine re... 28 2.5
AL132862-25|CAB60566.2| 60|Caenorhabditis elegans Hypothetical... 27 4.5
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 27 4.5
Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL032632-12|CAA21589.3| 333|Caenorhabditis elegans Hypothetical... 26 7.8
AF016665-8|AAC71178.1| 324|Caenorhabditis elegans Serpentine re... 26 7.8
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 125 bits (301), Expect = 1e-29
Identities = 58/108 (53%), Positives = 79/108 (73%)
Frame = +1
Query: 55 VRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSS 234
V+ YT+ N +L ++ + DPE+F+++ EKKRQ+ GLE+IASENFTS V+ L S
Sbjct: 13 VQRHKYTN--NENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGS 70
Query: 235 CLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNV 378
+ NKYSEG P RYYGGNEFID++E+L Q R+LE + L+P +WGVNV
Sbjct: 71 AMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNV 118
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 125 bits (301), Expect = 1e-29
Identities = 58/108 (53%), Positives = 79/108 (73%)
Frame = +1
Query: 55 VRNFNYTSTMNNKLLNGNLWETDPELFNLITKEKKRQQAGLEMIASENFTSVPVLQCLSS 234
V+ YT+ N +L ++ + DPE+F+++ EKKRQ+ GLE+IASENFTS V+ L S
Sbjct: 36 VQRHKYTN--NENILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGS 93
Query: 235 CLHNKYSEGMPYQRYYGGNEFIDEIEILAQNRSLETYKLNPEEWGVNV 378
+ NKYSEG P RYYGGNEFID++E+L Q R+LE + L+P +WGVNV
Sbjct: 94 AMCNKYSEGYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNV 141
>U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical
protein F25B4.6 protein.
Length = 462
Score = 30.3 bits (65), Expect = 0.48
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 175 LEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQR--YYGGNEFIDEIEILAQNRSLETYK 348
+E+ +NF L+ ++ KY+ G+ Q+ + NE I I + + +ETYK
Sbjct: 19 IELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYK 78
Query: 349 LNPEEWG 369
++ + G
Sbjct: 79 ISTDSIG 85
>U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthase
protein.
Length = 458
Score = 30.3 bits (65), Expect = 0.48
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 175 LEMIASENFTSVPVLQCLSSCLHNKYSEGMPYQR--YYGGNEFIDEIEILAQNRSLETYK 348
+E+ +NF L+ ++ KY+ G+ Q+ + NE I I + + +ETYK
Sbjct: 15 IELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNEDIVSISLTVTRKLIETYK 74
Query: 349 LNPEEWG 369
++ + G
Sbjct: 75 ISTDSIG 81
>U10402-5|AAA19066.2| 650|Caenorhabditis elegans Tryptophanyl (w)
trna synthetaseprotein 2, isoform a protein.
Length = 650
Score = 30.3 bits (65), Expect = 0.48
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 136 NLITKEKKRQQAGLEMIASENFTSVPVLQCLSSCLHNK 249
N + KEKK G + EN P QC S CL NK
Sbjct: 226 NKLKKEKKENNGGSDRNLDENSLFHPTFQC-SICLENK 262
>U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein115 protein.
Length = 367
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 324 LCQYFYFINEFISAIVPLI 268
L +YFY N F+S IVP I
Sbjct: 215 LAKYFYLFNSFVSDIVPCI 233
>AF039049-2|AAB94252.2| 297|Caenorhabditis elegans Serpentine
receptor, class x protein67 protein.
Length = 297
Score = 27.9 bits (59), Expect = 2.5
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Frame = -1
Query: 348 LVCFQ*PILCQYFYFINEFISAIVPL---IWHTL--------*VFIVKT*TQAL*YRN*C 202
L C++ +L + IN F + +VPL IW T+ ++IV+T A+ Y+ C
Sbjct: 84 LFCYESSVLTHFCISINRFCAVLVPLKYDIWFTIKNTKKIIALLWIVETIIAAIFYQYLC 143
Query: 201 KVF 193
VF
Sbjct: 144 NVF 146
>AL132862-25|CAB60566.2| 60|Caenorhabditis elegans Hypothetical
protein Y73F8A.32 protein.
Length = 60
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2
Query: 362 SSGFSLYVSSDLFC 321
SSGFSLYV S LFC
Sbjct: 42 SSGFSLYVFSVLFC 55
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 127 ELFNLITKEKKRQQAGLEMI-ASENFTSVPV 216
ELF++ KEK + +A +E+I AS F +VP+
Sbjct: 1829 ELFSMSLKEKTKTRALIEIISASSEFGNVPM 1859
>Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical
protein F32D8.2 protein.
Length = 568
Score = 26.6 bits (56), Expect = 5.9
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 16 KYIFFLYFQFSIPVRNFN---YTSTMN-NKLLNG-NLWETDPELFNLITKEKKRQQAGLE 180
KY F + + + N N Y MN N+LL+ N + EL N KEK + +
Sbjct: 380 KYPMFAFRPSNQFIENNNQKLYFMNMNFNRLLSSTNFNQMLVELIN--PKEKSSKSVFIA 437
Query: 181 MIASENFTSVPVLQCLSSCLHNKYSEGMP 267
S N TS + + + C++ S G P
Sbjct: 438 QPTSRNCTSEGISENICLCMNMSTSSGYP 466
>AL032632-12|CAA21589.3| 333|Caenorhabditis elegans Hypothetical
protein Y11D7A.1 protein.
Length = 333
Score = 26.2 bits (55), Expect = 7.8
Identities = 21/74 (28%), Positives = 31/74 (41%)
Frame = -2
Query: 371 TPHSSGFSLYVSSDLFCANISISSMNSFPP*YL*YGIPSEYLL*RHELKHCNTGTDVKFS 192
T HSS F+ V +D A +S+ F P I S L E+ N+ ++ +
Sbjct: 142 TVHSSHFAAMVQTDRPIAFVSLEEKKYFAPCDFTNHIDSVRL--NSEMTSINSAIEIDLT 199
Query: 191 DAIISSPACWRFFS 150
I+S FFS
Sbjct: 200 GQIVSDSIGRNFFS 213
>AF016665-8|AAC71178.1| 324|Caenorhabditis elegans Serpentine
receptor, class h protein250 protein.
Length = 324
Score = 26.2 bits (55), Expect = 7.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3
Query: 352 LACMFPVTYFVPIF 311
L C+FP TY +PIF
Sbjct: 138 LMCLFPPTYTIPIF 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,981,363
Number of Sequences: 27780
Number of extensions: 182399
Number of successful extensions: 432
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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