Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M15
(569 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces p... 87 2e-18
SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces po... 48 1e-06
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 31 0.16
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.63
SPAC23G3.11 |rpn6||19S proteasome regulatory subunit Rpn6|Schizo... 28 0.84
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 27 1.5
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 27 1.5
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 1.9
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 27 2.6
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 26 3.4
SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase ... 26 4.5
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 5.9
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 25 5.9
SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces pomb... 25 5.9
SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr ... 25 5.9
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 25 5.9
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 25 7.8
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 25 7.8
>SPBC1709.17 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 87.0 bits (206), Expect = 2e-18
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Frame = +3
Query: 126 LVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRTGV 305
L + + M +E A+++LN LQSN ++ +RK + + +E M +L G
Sbjct: 13 LKSSRIGMNPQTKTFEGAINRLNSLQSNAKVLEVLRKRGKIPNDQSMVE-MRHWLRCIGY 71
Query: 306 TLTKLDELSVIHVAGTKGKGSTSAMCDSILRH---HGFRT-----GFFSSPHLIAVRERI 461
+ L+ L+VIHVAGTKGKGST A SIL+ G R+ G ++SPHL +V ERI
Sbjct: 72 QPSDLNRLNVIHVAGTKGKGSTCAFTSSILQQIQKSGERSIPKCIGMYTSPHLRSVCERI 131
Query: 462 RLDGKIVSEEKFAQHFHRVYNXXXXXXXXXXXXPKY 569
+L+GK +S+E F ++F V+ P Y
Sbjct: 132 QLNGKPISQELFTKYFFDVWERLENAVGSDSEKPMY 167
>SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 47.6 bits (108), Expect = 1e-06
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 321 DELSVIHVAGTKGKGSTSAMCDSILRHHGFRTGFFSSPHLIAVRERIRLDGKIVSEEKF 497
+ + +AGT GKGS + + L +TG ++SPH + R+ I ++G+I SEE F
Sbjct: 22 ESFCAVQIAGTNGKGSICSYIYTSLLQAAIKTGRYTSPHFLEPRDTISINGQIASEEIF 80
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 30.7 bits (66), Expect = 0.16
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 230 KKGFENW*KMHKFRRYGKISVQNWCYSY 313
+K F+ W ++++FRR+G I + N+ S+
Sbjct: 270 RKEFQRWLRLYEFRRFGLIGLSNFVNSF 297
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.7 bits (61), Expect = 0.63
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 153 SVKSNYEDAVHKLNKLQSNKSTIDQIRKD--LRTGKRCTNLED 275
++K +ED + KLN SN++++ +KD ++ +RC+ LE+
Sbjct: 123 NLKHQFEDQIEKLNSEISNQNSLILQKKDELEKSIQRCSELEE 165
Score = 25.4 bits (53), Expect = 5.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 132 NKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERY 287
NKL + N + V KLN+LQ+N + +K L+ ++++D+E +
Sbjct: 41 NKLSQNEEDAKNMDSVVQKLNELQNN---VVAFQKLLQEKTPLSSIQDLEGF 89
>SPAC23G3.11 |rpn6||19S proteasome regulatory subunit
Rpn6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 28.3 bits (60), Expect = 0.84
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 117 RSYLVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTID 224
R L KL+ +Y S+Y DA++ +N L S +D
Sbjct: 124 RQALETKLISLYYDNSSYTDAINLINTLLSELKRMD 159
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/73 (21%), Positives = 31/73 (42%)
Frame = +3
Query: 24 FFAIIITYCNTTSFEIV*STFDRLMCSSSLYRSYLVNKLVRMYSVKSNYEDAVHKLNKLQ 203
F +++ + + +F T+D M S +R + L+ + N+E+A
Sbjct: 226 FEILLVAFASQKNFWFFEKTYDLFMQSKLTWRPFTYRVLIESFMKFGNFEEAEKLAYSYV 285
Query: 204 SNKSTIDQIRKDL 242
NK ID + D+
Sbjct: 286 KNK--IDSLSSDV 296
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 111 LYRSYLVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTI-DQIRKDLRTGKRCTN 266
L+ ++ KL V Y H LNKLQS K+ + D R + + C N
Sbjct: 172 LHSMVILMKLHSYNVVNGWYSYCYHSLNKLQSKKTDLDDDERSSVEFYEHCLN 224
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 1.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 102 SSSLYRSYLVN--KLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDL 242
SSS ++ L N L R +++S+YED NKL S + IR+ +
Sbjct: 73 SSSNFKERLNNIGGLKRSRTLESSYEDETETANKLSRVSSLVSVIRQTI 121
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 337 ITDSSSNFVRVTPVLNRYLSISSKFVHLLPVLKSFL 230
++D S V T L +++IS K V+L+P LKS L
Sbjct: 486 LSDPSDLVVSRTLELLAHIAISHKSVNLVPFLKSLL 521
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 246 TGKRCTNLEDMERYLFRTGVTLTKLDELSVIHVAGTKGKGS 368
T K + ED+ R + G LTK ++ +AGT GK S
Sbjct: 24 THKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNGKVS 64
>SPAC1071.05 |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 25.8 bits (54), Expect = 4.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 286 ICSELVLLLQS*MNYL*YMLQGPRGRARRAQCVILYYDITGSVLDFSHR 432
+ SE + L S N+L +L+ + A A LY+ + GS+L+F+ R
Sbjct: 243 LASETIYSLPSLENFLYMLLKNTKNLALVAG-KDLYFGVGGSILEFNSR 290
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 93 LMCSSSLYRSYLVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQ 227
L + + YR L K + K+ ++++ +L+KLQ +++ IDQ
Sbjct: 615 LKSTENRYRQLLQEKEEELEIQKAAVDESLLQLSKLQLDRNDIDQ 659
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 156 VKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTN 266
+K+N EDAVH L K ++ S ++ D+ KR +N
Sbjct: 37 IKTNQEDAVHDL-KYENFVSKNHVLQSDINGKKRDSN 72
>SPAC29E6.07 ||SPAC30.11|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 116
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -3
Query: 234 FLFDL*LI---CLTVVYLIYVLHPHNSTS 157
F F+L L CL +VY Y+LH +TS
Sbjct: 28 FFFELRLFSPQCLFIVYFFYLLHVRINTS 56
>SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 392
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 432 PHLIAVRERIRLDGKIVSEEKFAQHFHRV 518
P IAV E I+ I EEK Q+ H +
Sbjct: 275 PKFIAVGEAIKFRKSIGGEEKIQQYCHEI 303
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 25.4 bits (53), Expect = 5.9
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +3
Query: 153 SVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRTGVTLTKLDELS 332
+V+SNY+DA+H L +D + L TN+ E++ T ++ +D L+
Sbjct: 88 AVRSNYQDALHHLILQAREAIRLDDAEERLLALPDPTNV--FEKFPQETALSKFSVDGLN 145
Query: 333 V 335
V
Sbjct: 146 V 146
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 7.8
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 168 YEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDME-----RYLFRTGVTLTKLDELS 332
+ D ++K +SN+ I++ + K TNL+D+ +Y + T LD+L+
Sbjct: 10 HSDDLNKEESGESNRVNIEEPEHHDNSNKESTNLDDLNMLEEPKYHDNSNKESTNLDDLN 69
Query: 333 VI 338
++
Sbjct: 70 ML 71
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 25.0 bits (52), Expect = 7.8
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +3
Query: 123 YLVNKLVRMYSVKSNYEDAVHKLNKLQSNK 212
Y+++ L ++ + +N+ED HK+++ K
Sbjct: 459 YVLSFLQKVLIIDTNFEDGTHKISEYTKEK 488
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,208,351
Number of Sequences: 5004
Number of extensions: 43385
Number of successful extensions: 144
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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