Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M15
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-5|AAC46527.1| 510|Caenorhabditis elegans Hypothetical pr... 120 6e-28
U23172-4|AAL02494.1| 521|Caenorhabditis elegans Hypothetical pr... 120 6e-28
U23172-6|AAV58869.1| 484|Caenorhabditis elegans Hypothetical pr... 120 7e-28
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 30 1.3
AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical ... 29 2.4
U51999-6|AAV28361.1| 380|Caenorhabditis elegans Hypothetical pr... 28 5.4
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 28 5.4
AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical ... 28 5.4
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 27 9.5
U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical pr... 27 9.5
U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical pr... 27 9.5
U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical pr... 27 9.5
AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin p... 27 9.5
AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin p... 27 9.5
>U23172-5|AAC46527.1| 510|Caenorhabditis elegans Hypothetical
protein F25B5.6a protein.
Length = 510
Score = 120 bits (290), Expect = 6e-28
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Frame = +3
Query: 141 VRMYSVKSN--YEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRTGVTLT 314
+RM S K+ YE++V LN LQSN +TI ++R R + NL +YL ++
Sbjct: 25 LRMSSEKAVPCYEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESLNISAE 83
Query: 315 KLDELSVIHVAGTKGKGSTSAMCDSILRHHGFRTGFFSSPHLIAVRERIRLDGKIVSEEK 494
L+ L++IHV+GTKGKGS A +SILR G RTGF+SSPHL+ VRERI++DG+ VSE+
Sbjct: 84 DLNALNIIHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQPVSEQM 143
Query: 495 FAQHFHRVYN 524
FA+ F VY+
Sbjct: 144 FAEEFFHVYD 153
>U23172-4|AAL02494.1| 521|Caenorhabditis elegans Hypothetical
protein F25B5.6b protein.
Length = 521
Score = 120 bits (290), Expect = 6e-28
Identities = 63/130 (48%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Frame = +3
Query: 141 VRMYSVKSN--YEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRTGVTLT 314
+RM S K+ YE++V LN LQSN +TI ++R R + NL +YL ++
Sbjct: 36 LRMSSEKAVPCYEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESLNISAE 94
Query: 315 KLDELSVIHVAGTKGKGSTSAMCDSILRHHGFRTGFFSSPHLIAVRERIRLDGKIVSEEK 494
L+ L++IHV+GTKGKGS A +SILR G RTGF+SSPHL+ VRERI++DG+ VSE+
Sbjct: 95 DLNALNIIHVSGTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQPVSEQM 154
Query: 495 FAQHFHRVYN 524
FA+ F VY+
Sbjct: 155 FAEEFFHVYD 164
>U23172-6|AAV58869.1| 484|Caenorhabditis elegans Hypothetical
protein F25B5.6c protein.
Length = 484
Score = 120 bits (289), Expect = 7e-28
Identities = 59/119 (49%), Positives = 81/119 (68%)
Frame = +3
Query: 168 YEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRTGVTLTKLDELSVIHVA 347
YE++V LN LQSN +TI ++R R + NL +YL ++ L+ L++IHV+
Sbjct: 10 YEESVRLLNGLQSNAATIKKLRVQ-RENLQAINLPQCRKYLESLNISAEDLNALNIIHVS 68
Query: 348 GTKGKGSTSAMCDSILRHHGFRTGFFSSPHLIAVRERIRLDGKIVSEEKFAQHFHRVYN 524
GTKGKGS A +SILR G RTGF+SSPHL+ VRERI++DG+ VSE+ FA+ F VY+
Sbjct: 69 GTKGKGSACAFVESILRSQGLRTGFYSSPHLVHVRERIQVDGQPVSEQMFAEEFFHVYD 127
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 138 LVRMYSVKSNYEDA--VHKLNKLQSNKSTIDQIRKDLRTGKRC 260
+V+ S+ N E++ VHKL ++ K ++++ + LR K+C
Sbjct: 152 IVKSASILKNLENSSDVHKLRAMEEEKRILEEVVEGLRDQKKC 194
>AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical
protein H28O16.2 protein.
Length = 366
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 171 EDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRTGVTLTKLDELSVIHVAG 350
++ + K+ Q K TI+ ++ ++ ED+ER +G K++E S IH
Sbjct: 6 DEIIDKVASGQRKKDTIEDTEEEGTRKRKIEQFEDIERPNELSGFKKQKIEENSEIHAEE 65
Query: 351 TK 356
T+
Sbjct: 66 TE 67
>U51999-6|AAV28361.1| 380|Caenorhabditis elegans Hypothetical
protein C43H6.1 protein.
Length = 380
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/87 (24%), Positives = 40/87 (45%)
Frame = +3
Query: 120 SYLVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYLFRT 299
SYL + R+ SVK Y +H L + Q + + ++++R++ + + T L R L R
Sbjct: 208 SYLNDWEKRLESVKYLYVRVLHGLGEYQISMTMLNKVREETKNNEEKTAL---SRALMRM 264
Query: 300 GVTLTKLDELSVIHVAGTKGKGSTSAM 380
+ +++ K T+AM
Sbjct: 265 AMQAGDEKAMNIYAEEANKLSNGTNAM 291
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 126 LVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYL 290
L NKL + +++ +ED LN +S +S D + LE+ ER L
Sbjct: 223 LSNKLTELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRL 277
>AC024823-3|AAP40515.1| 395|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1c protein.
Length = 395
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 126 LVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYL 290
L NKL + +++ +ED LN +S +S D + LE+ ER L
Sbjct: 223 LSNKLTELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRL 277
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 126 LVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYL 290
L NKL + +++ +ED LN +S +S D + LE+ ER L
Sbjct: 223 LSNKLTELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRL 277
>AC024823-1|AAL32257.1| 510|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 126 LVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTIDQIRKDLRTGKRCTNLEDMERYL 290
L NKL + +++ +ED LN +S +S D + LE+ ER L
Sbjct: 223 LSNKLTELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRL 277
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 144 RMYSVKSNYEDAVHKLNKLQSNKST 218
R+ + K+ Y DAVH+ NKL + +T
Sbjct: 165 RLATYKAKYRDAVHRHNKLVDDVNT 189
>U53342-6|AAA96218.1| 466|Caenorhabditis elegans Hypothetical
protein F01G12.6 protein.
Length = 466
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 87 DRLMCSSSLYRSYLVNKLVRMYSVKSNYEDAVHKLNKLQSNKSTI 221
D L SS LV V + NY + H+LNKL+ S +
Sbjct: 31 DYLEAESSALADRLVKGQVNLAQEAENYINIAHELNKLRDMNSDV 75
>U00025-4|AAN65312.1| 606|Caenorhabditis elegans Hypothetical
protein PAR2.4b protein.
Length = 606
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 273 DMERYLFRTGVTLTKLDELSVIHVAGTKGKGSTSAMC-DSILRHHGFRTGF-FSSPHLIA 446
DME R +L + D L V T+GKG+ +A D + +G T + SPH
Sbjct: 374 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 433
Query: 447 VRE 455
+E
Sbjct: 434 QKE 436
>U00025-3|AAA50619.1| 804|Caenorhabditis elegans Hypothetical
protein PAR2.4a protein.
Length = 804
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 273 DMERYLFRTGVTLTKLDELSVIHVAGTKGKGSTSAMC-DSILRHHGFRTGF-FSSPHLIA 446
DME R +L + D L V T+GKG+ +A D + +G T + SPH
Sbjct: 572 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 631
Query: 447 VRE 455
+E
Sbjct: 632 QKE 634
>AB110824-1|BAD80739.1| 606|Caenorhabditis elegans chondroitin
polymerizing factor-S protein.
Length = 606
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 273 DMERYLFRTGVTLTKLDELSVIHVAGTKGKGSTSAMC-DSILRHHGFRTGF-FSSPHLIA 446
DME R +L + D L V T+GKG+ +A D + +G T + SPH
Sbjct: 374 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 433
Query: 447 VRE 455
+E
Sbjct: 434 QKE 436
>AB110823-1|BAD80738.1| 804|Caenorhabditis elegans chondroitin
polymerizing factor protein.
Length = 804
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 273 DMERYLFRTGVTLTKLDELSVIHVAGTKGKGSTSAMC-DSILRHHGFRTGF-FSSPHLIA 446
DME R +L + D L V T+GKG+ +A D + +G T + SPH
Sbjct: 572 DMEELKRRCKRSLLETDVLPVHPAVSTEGKGTAAAAALDDAVDRYGANTIYLLLSPHADV 631
Query: 447 VRE 455
+E
Sbjct: 632 QKE 634
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,155,705
Number of Sequences: 27780
Number of extensions: 239981
Number of successful extensions: 636
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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