Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M14
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   2.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   7.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   7.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 427 SAVFKGFFSVRVVIRQRW----FPRIDPVYPGYVERSAITSSA 311
           S +F   FS+ V+ R       FP I  +YP Y   S++   A
Sbjct: 137 SGMFTTAFSIAVLYRPDTKYMKFPAIYEIYPNYFFDSSVIEEA 179


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -3

Query: 427 SAVFKGFFSVRVVIRQRW----FPRIDPVYPGYVERSAITSSA 311
           S +F   FS+ V+ R       FP I  +YP Y   S++   A
Sbjct: 137 SGMFTTAFSIAVLYRPDTKYMKFPAIYEIYPNYFFDSSVIEEA 179


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 297 ICHTNALEVIADLSTYPGYTGSMRGNQRC 383
           I  T  +E+I +L  +P Y    R  Q C
Sbjct: 331 IGETMPMELIENLRNHPEYIDETRNYQEC 359


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 185 TVIYTLGFLCLLSTVL 232
           T +    FLCL ST+L
Sbjct: 8   TTLINAAFLCLASTIL 23


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 27  DIISARSSRKLDTGVDL*SFVIVRSSAFP*LNIVFAKQVLPNSV 158
           DI+       LD+ V+    V+V     P + + +AK +LPN++
Sbjct: 22  DIVGFLKKGPLDSNVE----VVV---GVPSIYLTYAKNILPNNI 58


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 433 IPSAVFKGFFSVRVVIRQRWFP 368
           IP+ V+ G F  R ++ + W P
Sbjct: 338 IPAPVYYGNFPPRPIMVRPWVP 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,343
Number of Sequences: 438
Number of extensions: 3090
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)