Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M14
(510 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35670.1 68418.m04261 calmodulin-binding family protein conta... 31 0.34
At3g17225.1 68416.m02200 invertase/pectin methylesterase inhibit... 29 2.4
At3g17230.1 68416.m02201 invertase/pectin methylesterase inhibit... 28 4.2
At1g77620.1 68414.m09037 expressed protein 28 4.2
At5g04370.1 68418.m00429 S-adenosyl-L-methionine:carboxyl methyl... 27 5.5
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 27 5.5
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 27 5.5
At1g15165.1 68414.m01813 U-box domain-containing protein contain... 27 5.5
At5g16300.2 68418.m01906 expressed protein 27 7.3
At5g16300.1 68418.m01905 expressed protein 27 7.3
At1g55770.1 68414.m06385 invertase/pectin methylesterase inhibit... 27 9.7
At1g13580.1 68414.m01592 longevity-assurance (LAG1) family prote... 27 9.7
>At5g35670.1 68418.m04261 calmodulin-binding family protein contains
IQ calmodulin-binding motif, Pfam:PF00612
Length = 442
Score = 31.5 bits (68), Expect = 0.34
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 118 NQGKADDLTITKDHRSTPVSS--FRDDRALIISKVFR 14
NQ +A + I K H++TP+S +D A+II FR
Sbjct: 135 NQSEATETHIPKKHQTTPISKLFLEEDAAVIIQSAFR 171
>At3g17225.1 68416.m02200 invertase/pectin methylesterase inhibitor
family protein similar to SP|P83326 Pectinesterase
inhibitor (Pectin methylesterase inhibitor) (PMEI)
{Actinidia chinensis}; contains Pfam profile PF04043:
Plant invertase/pectin methylesterase inhibitor
Length = 185
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 392 DPNRKEAFEDCARDYHCSIRIIE 460
DP K FE C RDY +I+ IE
Sbjct: 100 DPTLKIPFETCVRDYEGAIKAIE 122
>At3g17230.1 68416.m02201 invertase/pectin methylesterase inhibitor
family protein similar to SP|P83326 Pectinesterase
inhibitor (Pectin methylesterase inhibitor) (PMEI)
{Actinidia chinensis}; contains Pfam profile PF04043:
Plant invertase/pectin methylesterase inhibitor
Length = 351
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 392 DPNRKEAFEDCARDYHCSIRIIE 460
DP + ++E C RDY +I+ IE
Sbjct: 100 DPTLRTSYETCVRDYEGAIKAIE 122
>At1g77620.1 68414.m09037 expressed protein
Length = 1151
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 353 YWVDAGKPTLPDDDPNRKEAFEDCARDYHCS 445
YW D K T P DP+R E E Y S
Sbjct: 759 YWPDMQKETNPLADPSRAEILEAACYQYETS 789
>At5g04370.1 68418.m00429 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 396
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 380 LPDDDPNRKEAFEDCARDYHCSIRIIENHMATFGKDCNSD 499
LP DPN KE E ++ IR +E H G CN D
Sbjct: 288 LPFYDPNEKEIKEMVQKEGSFEIRDLETHGYDLG-HCNQD 326
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 300 CHTNALEVIADLSTYPGYTGSMRGNQRCLMTTLTEKKPL 416
CHT VIADL T+ + G + C TT + K L
Sbjct: 338 CHTKKFSVIADLKTHEKHCGKNKWLCSC-GTTFSRKDKL 375
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 300 CHTNALEVIADLSTYPGYTGSMRGNQRCLMTTLTEKKPL 416
CHT VIADL T+ + G + C TT + K L
Sbjct: 338 CHTKKFSVIADLKTHEKHCGKNKWLCSC-GTTFSRKDKL 375
>At1g15165.1 68414.m01813 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 295
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 199 FRIFMFIINSIRSARIKSQRILHPVSVLCNRM*FVTQMHWRLLRTFLHIPGILG 360
FR +F N++ + +L P++ L + F +Q HW+L HI G +G
Sbjct: 27 FRTELFFSNAVNLEICVAATVLTPLTPLLG-LYFGSQAHWQLNLFGEHIKGFVG 79
>At5g16300.2 68418.m01906 expressed protein
Length = 1034
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 127 FSQNKCYQTL*YCLLFKKNDRDLYFRIFMFIINSIRSARIKSQRILHPVSVLCNRM*FVT 306
+ QNKCY ++ L D++L F + +++ S+ I P +++ + F+
Sbjct: 562 YVQNKCYDSV--SALLADVDKELEF-----LCAAVKKENKDSEAI--PPAIIIEKSLFMG 612
Query: 307 QMHWRLLRTFLHIPGILGR----CGETNAA 384
++ + LL H+P ILG C ET A
Sbjct: 613 RLLFALLNHSKHVPLILGSPRLWCRETMTA 642
>At5g16300.1 68418.m01905 expressed protein
Length = 1068
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 127 FSQNKCYQTL*YCLLFKKNDRDLYFRIFMFIINSIRSARIKSQRILHPVSVLCNRM*FVT 306
+ QNKCY ++ L D++L F + +++ S+ I P +++ + F+
Sbjct: 562 YVQNKCYDSV--SALLADVDKELEF-----LCAAVKKENKDSEAI--PPAIIIEKSLFMG 612
Query: 307 QMHWRLLRTFLHIPGILGR----CGETNAA 384
++ + LL H+P ILG C ET A
Sbjct: 613 RLLFALLNHSKHVPLILGSPRLWCRETMTA 642
>At1g55770.1 68414.m06385 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|Q43111
Pectinesterase 3 precursor (EC 3.1.1.11) (Pectin
methylesterase 3) {Phaseolus vulgaris}, SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 175
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +2
Query: 386 DDDPNRKEAFEDCARDYHCSIRIIENHMATFGKDCNSD 499
D +P ++ EDC +DY ++ +++ ++ D ++D
Sbjct: 87 DLEPAIEDTLEDCQKDYQDAVEQLDDSISAMLADAHTD 124
>At1g13580.1 68414.m01592 longevity-assurance (LAG1) family protein
similar to Alternaria stem canker resistance protein
(ASC1) [Lycopersicon esculentum] GI:7688742; contains
Pfam profile PF03798: Longevity-assurance protein (LAG1)
Length = 239
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 242 VSNLNESCIRCLCYVTGCDLSHKCTGGYCGPFYISRVY-WVDAGKPTLPDDDPNRK 406
+ ES +C+ Y++ L+ T Y P++++ Y WV G T PD K
Sbjct: 72 IRKFKESAWKCVYYLSAEILALSVT--YNEPWFMNTKYFWVGPGDQTWPDQQTKLK 125
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,884,477
Number of Sequences: 28952
Number of extensions: 223110
Number of successful extensions: 547
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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