Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M12
(468 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 28 0.82
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 1.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 1.9
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 27 1.9
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 27 1.9
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 26 2.5
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 26 2.5
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 3.3
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 25 4.4
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 25 4.4
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 25 4.4
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 25 5.8
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 5.8
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 25 7.6
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 7.6
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 25 7.6
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 27.9 bits (59), Expect = 0.82
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +2
Query: 125 PLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTN 289
P + DR PI NG S H T F+P+ R HS P T+
Sbjct: 323 PYKTMSLTDRAEPIVMNGHMRSLHNATSPFRPFSPSYRSSDTHSPRTRSPNVQTH 377
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 1.4
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +2
Query: 2 GGVAGGRRGETPRH*PSVNPMHLALPSTPPSHT---RYERRVRGPLSHTVVRDRRPPIHS 172
GGV G R+ TP+ + P+ PS P S + E R P + P +
Sbjct: 56 GGVVGERKSNTPKS-FAAPPVPTGAPSLPTSSNNTQQAEERPSMPALGGLFAGGMPKLRH 114
Query: 173 NGRRPSAHAQTDAAPRFTPTGR-RPP 247
G+ ++ A A TP RPP
Sbjct: 115 IGKSSASAAPPSAPAPPTPQSELRPP 140
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 1.4
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +2
Query: 47 PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHS-NGRRPSAHAQTDAAPRF 223
PS + + +PST P P S + PP+ + + PS A + A P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 224 TPTGRRPPVHSSTGGVPYYTTNVSVYRGPLPN 319
P+G P S P +V+V P P+
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.6 bits (56), Expect = 1.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 417 LRVFEIKCSMYDLEEKNNNKKPRRTASLNTELVFGRGPL*TET 289
L F C + LE NN+ + R+TAS+ +F R P+ ++T
Sbjct: 476 LNEFVKDCVVVYLE--NNDPEVRKTASITCSQLFARDPILSQT 516
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.6 bits (56), Expect = 1.9
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +3
Query: 192 LTLKQTPLLGSLQRAGAPQFTLQRVVFPITQQTFPFI----GAPFQIPTQYSKRPCAAVF 359
L KQ L+G Q+ G + + ++Q F + +PF++ QY PC + F
Sbjct: 580 LGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMHPCLSEF 639
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 26.6 bits (56), Expect = 1.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 245 PVHSSTGGVPYYTTNVSVYRGPLP 316
P+ S+T G+P YT+ V +RG +P
Sbjct: 271 PISSTTPGIPCYTSYVQ-HRGSIP 293
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.2 bits (55), Expect = 2.5
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 97 HTLRTTRARPLVTYRGSRPPPPNTLQRAAPLXXXXXXXXXXV-HSNGPAPPSSLFNGWCS 273
HTL T R+RP + + + P P ++ +A+ + H+ P ++ + +
Sbjct: 573 HTLGTLRSRPSFSEKSTFPAPLTSISQASTFQGDNRSPSTVIPHTQTEVPSANDTSKQLA 632
Query: 274 LLHNKR 291
LH+ R
Sbjct: 633 SLHDMR 638
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.2 bits (55), Expect = 2.5
Identities = 13/50 (26%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 37 APLT-VSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAA 183
AP++ ++ +AF++PL++ + L + + L +Y+G++ P N+ + A
Sbjct: 209 APVSSFADQNAFTNPLSTFASPDLASVSSPSLSSYKGAQSPNANSKRTKA 258
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 3.3
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 176 GRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTNVSVYRGPLPNTNSVFKE 340
G+R +A A P + G PP +S P T V+ P T+S F +
Sbjct: 237 GKRSAAQAMATVVPSVSTPGGTPPRFAS----PALTVESMVHAAPSTTTSSRFSK 287
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 4.4
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 218 RFTPTGRRPPVHSSTGG--VPYYTTNVSVY 301
RFTP +PPV + T G Y+ N +V+
Sbjct: 247 RFTPRDGKPPVVNGTNGDQSDYFGANAAVH 276
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 4.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 447 NTRATWKQKSLRVFEIKCSMYDLEE 373
+T T KQKS +VFE++ + D+ E
Sbjct: 510 STLVTLKQKSDKVFELELDIKDMRE 534
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 4.4
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 31 NSAPLTVSESDAFSSPLNSPLTHTLRTT 114
+++ L ++FSSPL++P HT+ +T
Sbjct: 248 SNSGLNPRSPNSFSSPLDNPALHTVDST 275
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.0 bits (52), Expect = 5.8
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +3
Query: 132 HIPWFETAAPQYTPTGGAPQLTLKQTPLLGSLQRAGAPQFTLQ 260
HI + P Y G P Q PL + R+G F L+
Sbjct: 319 HISPIQKHFPDYQEVGSTPTFVQTQCPLADNAVRSGMYYFYLK 361
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.0 bits (52), Expect = 5.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 323 NSVFKEAVRRGFLLLFFSSKSYILHFISKTLKLF 424
+S+F E + L LFFS+ +Y++ F T ++
Sbjct: 1064 HSLFNEHFCKSNLQLFFSTDTYVIFFEPNTENVY 1097
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 24.6 bits (51), Expect = 7.6
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 300 IGAPFQIP--TQYSKRPCAAVFYCYFFLLNHTYYILFQK 410
+G QIP T + AAV +C+ +L+ YY ++K
Sbjct: 689 LGGAAQIPSVTGINYSTWAAVAFCFNYLIRRGYYSWWKK 727
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 7.6
Identities = 18/70 (25%), Positives = 25/70 (35%)
Frame = +1
Query: 31 NSAPLTVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAPLXXXXXXX 210
+S PL+ S +S ++PLT TT T S T + PL
Sbjct: 339 SSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTT 398
Query: 211 XXXVHSNGPA 240
V S P+
Sbjct: 399 STSVSSTAPS 408
Score = 24.6 bits (51), Expect = 7.6
Identities = 18/70 (25%), Positives = 25/70 (35%)
Frame = +1
Query: 31 NSAPLTVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAPLXXXXXXX 210
+S PL+ S +S ++PLT TT T S T + PL
Sbjct: 453 SSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTT 512
Query: 211 XXXVHSNGPA 240
V S P+
Sbjct: 513 STSVSSTAPS 522
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 24.6 bits (51), Expect = 7.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 125 PLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRR 241
PLS ++ PPI N S++ + ++P +P R+
Sbjct: 395 PLSSRLLMIHSPPILQNQENISSNDNSKSSPESSPPARK 433
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,141,607
Number of Sequences: 5004
Number of extensions: 49138
Number of successful extensions: 161
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 178394480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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