Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M12
(468 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 33 0.12
SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17) 32 0.27
SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 31 0.63
SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4) 28 0.67
SB_8589| Best HMM Match : DUF164 (HMM E-Value=0.29) 30 0.83
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.83
SB_16221| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011) 29 1.9
SB_19453| Best HMM Match : RPE65 (HMM E-Value=2.5e-17) 29 1.9
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 29 2.5
SB_58915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_47130| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 27 5.9
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_17683| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 27 5.9
SB_7554| Best HMM Match : zf-CXXC (HMM E-Value=6.5e-08) 27 5.9
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 27 5.9
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_41369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_18261| Best HMM Match : Cornifin (HMM E-Value=1.6) 27 7.7
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_8542| Best HMM Match : PT (HMM E-Value=4) 27 7.7
SB_6317| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14) 27 7.7
SB_43674| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14) 27 7.7
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 35.9 bits (79), Expect = 0.017
Identities = 31/103 (30%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Frame = +2
Query: 2 GGVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGR 181
G V +G + V P A PS PSH +H P H +
Sbjct: 418 GPVIPASQGNSGAMQHGVAPPVSACPSHQPSHATMSDARLNTSTHLA-----PTPHHSSD 472
Query: 182 RPSAHAQTDAAPRFTPTGRRPPVHSS-TGGVPYYTTNVSVYRG 307
RP HA + AP PT R PP H S PY+ T+ G
Sbjct: 473 RPH-HATSYNAPSGMPTHREPPPHPSFASHQPYHVTSCDALSG 514
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 33.1 bits (72), Expect = 0.12
Identities = 27/84 (32%), Positives = 35/84 (41%)
Frame = +2
Query: 32 TPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDA 211
TP H P V+ P + PSHT V P SHT PP+ + P +
Sbjct: 449 TPSHTPPVSTPSHTPPVSTPSHT---PPVSTP-SHT------PPVSTPSNTPPVFTPSHT 498
Query: 212 APRFTPTGRRPPVHSSTGGVPYYT 283
P FTP+ PPV + + P T
Sbjct: 499 PPVFTPS-HTPPVSTPSNSPPVST 521
Score = 30.7 bits (66), Expect = 0.63
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +2
Query: 32 TPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDA 211
TP H P V+ P + PSHT V P SHT PP+ + P ++
Sbjct: 386 TPSHTPPVSTPSHTPPVSTPSHT---PPVSTP-SHT------PPVSTPSHTPPVSTPSNT 435
Query: 212 APRFTPTGRRP---PVHSSTGGVPYYTTNVS 295
P TP+ P P H+ P +T VS
Sbjct: 436 PPVSTPSHTPPVSTPSHTPPVSTPSHTPPVS 466
Score = 29.9 bits (64), Expect = 1.1
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +2
Query: 32 TPRH*PSVN-PMH---LALPS-TPPSHTRYERRVRGPLSHT---VVRDRRPPIHSNGRRP 187
TP H P V+ P H ++ PS TPP T SHT PP+ + P
Sbjct: 458 TPSHTPPVSTPSHTPPVSTPSHTPPVSTPSNTPPVFTPSHTPPVFTPSHTPPVSTPSNSP 517
Query: 188 SAHAQTDAAPRFTPTGRRPPVHSSTGGVP 274
++ P FTP+ PPV + + P
Sbjct: 518 PVSTPSNTLPVFTPS-HTPPVSTPSHTPP 545
>SB_49450| Best HMM Match : SH3_1 (HMM E-Value=6.9e-17)
Length = 288
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 52 SESDAF-SSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAP 186
++S +F SS + SPLT L RPLVT S PP T Q AAP
Sbjct: 20 TQSPSFTSSVVTSPLTVNL----CRPLVTIATSCPPVTTTAQAAAP 61
>SB_38286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.9 bits (69), Expect = 0.27
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 52 SESDAF-SSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAP 186
++S +F SS + SPLT L RPLVT S PP T Q AAP
Sbjct: 20 TQSPSFTSSVVTSPLTVNL----CRPLVTIATSCPPVTTTAQAAAP 61
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 30.7 bits (66), Expect = 0.63
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +2
Query: 86 PPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPR-FTPTGRRPPV 250
PP Y+R R P D R + RR + + D PR + P RPP+
Sbjct: 243 PPPRDPYDRERRDPYERDPYYDHRDDPRDDPRRDDPYRRYDDYPRDYPPDDYRPPL 298
>SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4)
Length = 304
Score = 28.3 bits (60), Expect(2) = 0.67
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 77 PSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTP 229
PSTPPS ++ R R S + RP +N PS T A + +P
Sbjct: 124 PSTPPSPRKHSRPCRPTRSQSSTSRARPVFQNN--NPSLVVHTGAPQKRSP 172
Score = 21.0 bits (42), Expect(2) = 0.67
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 206 DAAPRFTPTGRRPPVHSSTGGVPY 277
D +PR TP R+P + G V +
Sbjct: 203 DLSPRMTPRPRQPISPLAAGEVSF 226
>SB_8589| Best HMM Match : DUF164 (HMM E-Value=0.29)
Length = 306
Score = 30.3 bits (65), Expect = 0.83
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 158 PPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTG 265
P +H NG RPSAH +T P + + + +S G
Sbjct: 2 PQVHMNGGRPSAHRKTSKQPSTSNSPKNIAAKTSYG 37
>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 30.3 bits (65), Expect = 0.83
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 158 PPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTG 265
P +H NG RPSAH +T P + + + +S G
Sbjct: 2 PQVHMNGGRPSAHRKTSKQPSTSNSPKNIAAKTSYG 37
>SB_16221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 89 PSHTRYERRVRGPLSHT-VVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTG 265
PS R RR +G H + + + P+H N + D +PR +P RP + G
Sbjct: 491 PSAVRRNRRSKG--GHLPLTKAKSTPMHLNQIFEERESDMDESPRSSPRLERPHRRHAGG 548
Query: 266 GVPYYTTNVSVYRGPLPNTNS 328
G N P+P+T S
Sbjct: 549 GAIKAKRNTR-RLSPVPSTGS 568
>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
Length = 972
Score = 29.1 bits (62), Expect = 1.9
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = +3
Query: 345 CAAVFYCYFFLLNHTYYILFQKPLSFSVSKWLECYFC 455
C +YCY++ + YY + + + CY+C
Sbjct: 482 CYCYYYCYYYCYCYCYYCCYYCYCYYYYHHYYCCYYC 518
>SB_19453| Best HMM Match : RPE65 (HMM E-Value=2.5e-17)
Length = 511
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 333 SKRPCAAVFYCYFFLLNHTYYILFQKPLSFSVSKWL 440
S P A Y + F ++ +Y+IL + P FS+ ++L
Sbjct: 229 SLSPTKAEAYVHSFGMSESYFILLENPFFFSIPRFL 264
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 134 VTRGRARVVRSVCVRGELRGELNASDSLTVSGAEFLLDGLLRRL 3
V R RVV + G + GEL A S+T G E D L R +
Sbjct: 202 VKMARGRVVNVASIVGLIAGELTAPYSITKYGVEAFSDVLRREM 245
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 34 SAPLTVSESDAFSSPLNSPLTHTLRTTRARPLVTYRGSRPPPPNTLQRAAP 186
++P T S F+SP SP + + + P V R PP P++ ++P
Sbjct: 346 NSPRTSPRSSPFASPTGSPTSSPVGSPAQSPSVFRRIPPPPLPDSESDSSP 396
>SB_58915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 82 NSPLTHTLRTTRARPLVTYRGSRPPPPNTL 171
N+P + TL TT P+VT PPPP L
Sbjct: 138 NTP-SQTLATTPTAPMVTTPAPPPPPPPPL 166
>SB_47130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Frame = +2
Query: 89 PSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQ-----TDAAPRFTPTGRRPPVH 253
P H +Y RV P R +P R P Q T PTG H
Sbjct: 50 PEH-KYTNRVPQPEHKCTNRVPQPEHKCTNRVPQHRTQMYQQGTSTPDTNVPTGYLNTEH 108
Query: 254 SSTGGVPYYTTNVSVYRGPLPNTN 325
+ T VP + T + PNTN
Sbjct: 109 NCTNRVPQHRTQMYQQGTSTPNTN 132
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 137 TVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTG 265
T D R P+++ RRP +T+ R RPP SS G
Sbjct: 1733 TTFIDPRLPVNTTDRRPRPGPETEPPRRSRAPPPRPPPPSSRG 1775
>SB_20283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 58 SDAFSSPLNSPLTHTLRTTRARPLVTYRG----SRPPPPNTLQRAAPL 189
S A SS + P+T+ T++ + SRPPPP +L APL
Sbjct: 382 SPAVSSSSSQPVTNLFGPTQSSASSNFDAVPLASRPPPPYSLTPGAPL 429
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +2
Query: 143 VRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTNVSVYRGPLP 316
V R PP + ++ + + P FT G PP + P NV R PLP
Sbjct: 691 VTRRPPPPRPMAPKDASLHRASSPPGFTHKGSEPPPKPAPPARPGSVANVLGERKPLP 748
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.5 bits (58), Expect = 5.9
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 74 LPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVH 253
LP+ PP R +RGP S PP N P ++ P P R PP +
Sbjct: 240 LPAPPPGENRPPPPMRGPTS-----GGEPPPPKNAPPPPKRGSSNPPP---PPTRGPPSN 291
Query: 254 S-STGGVP 274
S +T G P
Sbjct: 292 SFTTQGPP 299
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 185 PSAHAQTDAAPRFTP-TGRRPPVHSSTGGVPYYTTNVSVYRGPLPNTNS 328
PS + T AAP TP T P V ST P ++ V P+T +
Sbjct: 1914 PSVASSTQAAPSVTPSTLMTPSVTPSTQAAPSAASSTQVAPSMAPSTQT 1962
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.5 bits (58), Expect = 5.9
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +2
Query: 35 PRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAA 214
PRH +ALP T P HT +R +HT+ P H+ +R + A
Sbjct: 934 PRHTTKQRNHTIALPVTIPRHTTKQR------NHTIALLVTIPRHTTKQRNHSIALLVTI 987
Query: 215 PRFTPTGRRPPVHSSTGGVPYYTT 286
PR T R + + +P +TT
Sbjct: 988 PRHTTKQRNHSI-ALLVTIPRHTT 1010
>SB_17683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 8 VAGGRRG-ETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVV 145
VA + G + P+ PSV+P+ +P PP H + ++ RG VV
Sbjct: 847 VAPNQSGSDPPKKSPSVSPIPFKVPMVPPVH-KVDKAGRGQERRVVV 892
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.5 bits (58), Expect = 5.9
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 74 LPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVH 253
LP+ PP R +RGP S PP N P ++ P P R PP +
Sbjct: 152 LPAPPPGENRPPPPMRGPTS-----GGEPPPPKNAPPPPKRGSSNPPP---PPTRGPPSN 203
Query: 254 S-STGGVP 274
S +T G P
Sbjct: 204 SFTTQGPP 211
>SB_7554| Best HMM Match : zf-CXXC (HMM E-Value=6.5e-08)
Length = 343
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +3
Query: 75 SPQLPPHTHATNDACAAPCHIPWF--ETAAPQYTPTGGA 185
SP PP +D APC+ F E P Y GGA
Sbjct: 280 SPAKPPEQRVGDDGEVAPCNCQVFTKEEGPPLYGQMGGA 318
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 125 PLSHTVVRDRRPPIHSNGRRPSAHAQTDAA 214
P +H V PPIH + RP H AA
Sbjct: 233 PAAHPVSTGPLPPIHPSQHRPQEHPHLPAA 262
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 27.5 bits (58), Expect = 5.9
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 32 TPRH*PSVNPMH-LALPSTPPSHTRYERRVRG-PLSHT---VVRDRRPPIHSNGRRPSAH 196
TP + PS N + A+P ++T Y + G P ++T R PP S G H
Sbjct: 329 TPGY-PSANTGYPTAIPGYSSANTGYPTAIPGYPSANTGYPTATPRYPPA-STGYPTVTH 386
Query: 197 AQTDAAPRFTPTGRRPPVHSS 259
+ + P F T RRPP+ ++
Sbjct: 387 PE-NGIPSFYETPRRPPLQTN 406
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 27.5 bits (58), Expect = 5.9
Identities = 27/94 (28%), Positives = 33/94 (35%), Gaps = 12/94 (12%)
Frame = +2
Query: 80 STPPSHTRYERR--VRGPLSHTVVRDRRPPIHSNGRRP--------SAHAQTDAAP-RFT 226
S P H R V PL+HT P H P S HA+ +P
Sbjct: 334 SRSPDHALCSNRSPVSSPLAHTTPTSTVPREHLKNASPSQIVESGSSPHAKEPVSPVHDV 393
Query: 227 PT-GRRPPVHSSTGGVPYYTTNVSVYRGPLPNTN 325
PT R PV S G P + R +P+ N
Sbjct: 394 PTEDRHSPVKSVGGNSPVSRVKEEIPRALIPSPN 427
>SB_41369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 353 RGARPL*ILSWYLEGGPYKRK 291
RGAR + ILS GGPYK K
Sbjct: 380 RGARMIDILSELTPGGPYKSK 400
>SB_18261| Best HMM Match : Cornifin (HMM E-Value=1.6)
Length = 500
Score = 27.1 bits (57), Expect = 7.7
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +2
Query: 56 NPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPS-AHAQTDAAPRF-TP 229
NP H P HTR +R DR P H+ R + H +TD + T
Sbjct: 206 NPCHTRTDRNNPCHTRTDR----DNQCNTRTDRDNPCHTRTYRDNPCHTRTDRDNQCNTI 261
Query: 230 TGRRPPVHSST 262
T R P H+ T
Sbjct: 262 TDRENPCHTRT 272
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 164 LGGGGLEPRYVTRGRARVVRSV 99
L GG L+P+YV R R RS+
Sbjct: 2408 LKGGALDPKYVLSSRVRTGRSI 2429
>SB_8542| Best HMM Match : PT (HMM E-Value=4)
Length = 650
Score = 27.1 bits (57), Expect = 7.7
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +2
Query: 35 PRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAA 214
PR+ PS NP LPS P +RY R + + IHS G P + Q+
Sbjct: 223 PRYYPSGNPQPWFLPSGNP-QSRYYRSWKSTAQVLPFLE----IHSPGITPLGNLQSRYY 277
Query: 215 PRFTPTGRRPP 247
P P R P
Sbjct: 278 PSGNPQSRYYP 288
>SB_6317| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14)
Length = 813
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 80 STPPSHTRYERRVRGPLSHTVVRDRRPPIHSN 175
S P TRY RRVR P H V I SN
Sbjct: 332 SQAPPETRYPRRVRRPPIHPVEYVTEGEIESN 363
>SB_43674| Best HMM Match : RVT_2 (HMM E-Value=2.5e-14)
Length = 813
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 80 STPPSHTRYERRVRGPLSHTVVRDRRPPIHSN 175
S P TRY RRVR P H V I SN
Sbjct: 332 SQAPPETRYPRRVRRPPIHPVEYVTEGEIESN 363
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,078,057
Number of Sequences: 59808
Number of extensions: 430718
Number of successful extensions: 1326
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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