Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M12
(468 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 34 0.042
At1g26150.1 68414.m03192 protein kinase family protein similar t... 34 0.042
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 31 0.29
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 31 0.29
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 30 0.68
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 30 0.68
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 30 0.90
At5g23490.1 68418.m02756 expressed protein 30 0.90
At1g69810.1 68414.m08032 WRKY family transcription factor 30 0.90
At2g20950.4 68415.m02474 expressed protein 24 1.2
At5g35604.1 68418.m04242 hypothetical protein 29 1.2
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 1.6
At1g78815.1 68414.m09187 expressed protein contains Pfam profile... 29 1.6
At5g04720.1 68418.m00482 disease resistance protein (CC-NBS-LRR ... 29 2.1
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila... 29 2.1
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 2.1
At3g07100.1 68416.m00845 protein transport protein Sec24, putati... 29 2.1
At5g28490.1 68418.m03466 expressed protein contains Pfam profile... 28 3.6
At4g28690.1 68417.m04099 expressed protein 27 4.8
At3g47330.1 68416.m05144 hypothetical protein contains Pfam prof... 27 4.8
At3g15250.1 68416.m01926 expressed protein ; expression supporte... 27 4.8
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 27 4.8
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 27 4.8
At3g30230.1 68416.m03820 myosin heavy chain-related similar to M... 27 6.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 6.3
At2g46370.2 68415.m05771 auxin-responsive GH3 family protein sim... 27 6.3
At2g46370.1 68415.m05770 auxin-responsive GH3 family protein sim... 27 6.3
At1g26460.1 68414.m03227 pentatricopeptide (PPR) repeat-containi... 27 6.3
At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 27 6.3
At5g33230.1 68418.m03927 hypothetical protein 27 8.4
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 27 8.4
At3g11000.1 68416.m01328 expressed protein 27 8.4
At1g78800.1 68414.m09184 glycosyl transferase family 1 protein c... 27 8.4
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 8.4
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 34.3 bits (75), Expect = 0.042
Identities = 28/92 (30%), Positives = 36/92 (39%)
Frame = +2
Query: 35 PRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAA 214
P H P P++ P PP H+ P V PP+HS P H+ A
Sbjct: 546 PVHSPPPPPVYSPPPPPPPVHSPPPPVFSPP---PPVYSPPPPVHSPP--PPVHSPPPPA 600
Query: 215 PRFTPTGRRPPVHSSTGGVPYYTTNVSVYRGP 310
P +P PPVHS P Y+ V+ P
Sbjct: 601 PVHSPP---PPVHSPPPPPPVYSPPPPVFSPP 629
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 34.3 bits (75), Expect = 0.042
Identities = 25/71 (35%), Positives = 32/71 (45%)
Frame = +2
Query: 35 PRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAA 214
PRH PS P PSTPPS + E P H R++ PP S PS + +D+
Sbjct: 195 PRHLPS--PPASERPSTPPSDS--EHPSPPPPGHPKRREQPPPPGSKRPTPSPPSPSDSK 250
Query: 215 PRFTPTGRRPP 247
P+ PP
Sbjct: 251 RPVHPSPPSPP 261
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.5 bits (68), Expect = 0.29
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Frame = +2
Query: 83 TPPSHTRYERRVRGPL---SHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVH 253
TPPSHT P S + PP H+ +H T P TPT PP +
Sbjct: 47 TPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCN 106
Query: 254 -SSTGGVPYYTTNVSVYRGPLPN 319
S P ++ S P P+
Sbjct: 107 CGSPPSHPSTPSHPSTPSHPTPS 129
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 31.5 bits (68), Expect = 0.29
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Frame = +2
Query: 83 TPPSHTRYERRVRGPL---SHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVH 253
TPPSHT P S + PP H+ +H T P TPT PP +
Sbjct: 47 TPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCN 106
Query: 254 -SSTGGVPYYTTNVSVYRGPLPN 319
S P ++ S P P+
Sbjct: 107 CGSPPSHPSTPSHPSTPSHPTPS 129
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 30.3 bits (65), Expect = 0.68
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 20 RRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGP---LSHTVVRDRRPPIHSNGRRPS 190
RRG+TP +P PS+PP RY RG + + VR RR P+ R P
Sbjct: 253 RRGDTPPRRRPASPSRGRSPSSPPPR-RYRSPPRGSPRRIRGSPVR-RRSPLPLRRRSPP 310
Query: 191 AHAQTDAAPRFTPTGRR 241
+ + PR +P RR
Sbjct: 311 PR-RLRSPPRRSPIRRR 326
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 30.3 bits (65), Expect = 0.68
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 20 RRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGP---LSHTVVRDRRPPIHSNGRRPS 190
RRG+TP +P PS+PP RY RG + + VR RR P+ R P
Sbjct: 260 RRGDTPPRRRPASPSRGRSPSSPPPR-RYRSPPRGSPRRIRGSPVR-RRSPLPLRRRSPP 317
Query: 191 AHAQTDAAPRFTPTGRR 241
+ + PR +P RR
Sbjct: 318 PR-RLRSPPRRSPIRRR 333
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 29.9 bits (64), Expect = 0.90
Identities = 22/96 (22%), Positives = 32/96 (33%)
Frame = +2
Query: 41 H*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPR 220
H PS +P H PS P+HT P P H+ P+ A
Sbjct: 219 HSPSHSPAHT--PSHSPAHTPSHSPAHAPSHSPAHAPSHSPAHAPSHSPAHSPSHSPATP 276
Query: 221 FTPTGRRPPVHSSTGGVPYYTTNVSVYRGPLPNTNS 328
+P+ P S P + S P P+ ++
Sbjct: 277 KSPSPSSSPAQSPATPSPMTPQSPSPVSSPSPDQSA 312
>At5g23490.1 68418.m02756 expressed protein
Length = 729
Score = 29.9 bits (64), Expect = 0.90
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 56 NPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTG 235
+P H + TPP H ++ P+S TVV D + P + + + + +P +P
Sbjct: 439 SPAHKKVDETPPKHVQFLE----PISKTVVDDAQNPSYGSAFDDPSSSN---SPLLSPVF 491
Query: 236 RRPPVHSSTGG 268
P S GG
Sbjct: 492 EEPSSSFSEGG 502
>At1g69810.1 68414.m08032 WRKY family transcription factor
Length = 387
Score = 29.9 bits (64), Expect = 0.90
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +1
Query: 52 SESDAFSSPLNSPLTH-TLRTTRARPLVTYRGSRPPPPNTLQRAAPLXXXXXXXXXXVHS 228
S S + S P H ++ TT + P VT +RP PN L PL S
Sbjct: 289 SSSTSASLSYFFPFHHFSISTTNSHPTVTLDLTRPNYPNQLPDDYPLSSSSFSLNFS--S 346
Query: 229 NGPAPPSS 252
P PPSS
Sbjct: 347 PDPPPPSS 354
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 158 PPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTNVSVYR 304
PP +S+ + T P TGRR S + V ++ + VS+Y+
Sbjct: 226 PPFYSSSDDEDDNNSTYLFPEIA-TGRRSRGVSGSSTVRFFLSRVSIYQ 273
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 32 TPRH*PSVNPMHLALPSTPPSHTRYERRVRG 124
T R+ PS +P H + +PP H R +R G
Sbjct: 162 TSRNRPS-SPFHPSQSRSPPPHARTQRYNNG 191
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 152 RRPPI-HSNGRRPSAHAQTDAAPRFTPTGRR----PPVHSS 259
RRP +S+ RR A A+TD +PR +P R PPV +S
Sbjct: 72 RRPSRGNSSPRRDKARARTDCSPRLSPPSRTMGPPPPVATS 112
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 29.1 bits (62), Expect = 1.6
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +2
Query: 32 TPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDA 211
TP + P V P + P TP Y ++ P H PI+S +P QT
Sbjct: 227 TPTYSPPVKPPPVHKPPTPI----YSPPIKPPPVHKPPT----PIYSPPVKPPP-VQTPP 277
Query: 212 APRFTPTGRRPPVHSSTGGVPYYTTNVS---VYRGPLPNTNSVFK 337
P ++P + PPVH P Y+ V V + P P + K
Sbjct: 278 TPIYSPPVKPPPVHKPP--TPTYSPPVKSPPVQKPPTPTYSPPIK 320
>At1g78815.1 68414.m09187 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 195
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 5 GVAGGRRGETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSH--TVVRDRRPPIH 169
G+A G P+ P P P PP+ +RYE + R + +R+++PP+H
Sbjct: 10 GIAEG--SSQPQSQPQPQPHQPQSPPNPPALSRYESQKRRDWNTFCQYLRNQQPPVH 64
>At5g04720.1 68418.m00482 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 811
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 272 PYYTTNVSVYRGPLPNTNSVFKEAVRRGFLLLFFSSKSYIL-HFISKTLKL 421
PY VS++ G + + E + L+L FSS Y+L FI+K KL
Sbjct: 525 PYKARVVSIHTGEMTQMDWFDMELPKAEVLILHFSSDKYVLPPFIAKMGKL 575
>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 959
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 185 PSAHAQTDAAPRFTPTGRRPPVHSSTGGVP 274
P H QT A P +P G +PP +T P
Sbjct: 671 PWTHGQTSAQPLNSPNGSKPPELPNTNNSP 700
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +2
Query: 29 ETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTD 208
E H P +P+H + P PPS E P+ H PP+ + P Q+
Sbjct: 676 EVHYHSPPPSPVHYSSPPPPPSAPCEESPPPAPVVH---HSPPPPMVHHSPPPPVIHQSP 732
Query: 209 AAPRFTPTGRRPPV 250
P G PPV
Sbjct: 733 PPPSPEYEGPLPPV 746
>At3g07100.1 68416.m00845 protein transport protein Sec24, putative
similar to protein transport protein Sec24A
(SEC24-related protein) [Homo sapiens] SWISS-PROT:O95486
Length = 1038
Score = 28.7 bits (61), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 70 SSPLNSPLTHTLRTTRARPLVTY-RGSRPPPPNTLQRAAP 186
S P +P T+R + P V+ GSRPPPP++ +P
Sbjct: 61 SGPPPAPPVGTMRPGQPSPFVSQIPGSRPPPPSSNSFPSP 100
>At5g28490.1 68418.m03466 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 190
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 41 H*PSVNPMHLALPSTPPSHTRYERRVRGPLSH--TVVRDRRPPI 166
H P+ NP + + TPPS +RYE + R + +R+ RPP+
Sbjct: 6 HQPNKNP-NSSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPL 48
>At4g28690.1 68417.m04099 expressed protein
Length = 448
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 158 PPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTNVS 295
PP+ S G +P+ A A+ PT PPV S T ++S
Sbjct: 316 PPVASQGSQPTCCAPPVASQGSQPTRYAPPVASQGNAQRIVTGSIS 361
>At3g47330.1 68416.m05144 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 664
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 88 PLTHTLRTTRARPLVTYRGSRPPPPNTLQ 174
PL++ R T+++ LV + G R P P T++
Sbjct: 575 PLSYQPRDTQSKALVIHSGIRDPAPPTIE 603
>At3g15250.1 68416.m01926 expressed protein ; expression supported
by MPSS
Length = 217
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -1
Query: 270 TPPVEE*TGGRRPVGVNRGAASV*A*AEGRRPLECIGGRRSRTTVCD 130
TP +GG R G + A V E RR + CIGG S T CD
Sbjct: 168 TPVPVRMSGGIRVGGRKKKAVRVRKKTEERRRVSCIGGSLSET--CD 212
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 27.5 bits (58), Expect = 4.8
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +2
Query: 41 H*PSVNPMHLALPSTPPS-HTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAP 217
H + N + LALP PP +T E+ + LS T+ PP S+ P A +D
Sbjct: 406 HNAASNALALALPDPPPPVNTTKEQDMIDLLSITLCTPSTPPAPSSQPSPPPPAGSDQNT 465
Query: 218 RFTP 229
P
Sbjct: 466 HIYP 469
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 59 PMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPP 163
P L +P P H +++ + GP H + RPP
Sbjct: 581 PRPLGVPMMQPMHQQHQLTMPGPPGHPQMMMNRPP 615
>At3g30230.1 68416.m03820 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 527
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 146 RDRRPPIHSNGRRPSAHAQTDAAPRFT--PTGRRPPVHSSTGGVP 274
RDR +S+ RR + A+TD +PR + P PP+ T P
Sbjct: 197 RDRSARGNSSPRREKSKARTDRSPRLSLPPRSMGPPLPVVTSPPP 241
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 27.1 bits (57), Expect = 6.3
Identities = 24/96 (25%), Positives = 35/96 (36%)
Frame = +2
Query: 29 ETPRH*PSVNPMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTD 208
ETP+ P +P P T + PL V D RRP + +
Sbjct: 574 ETPK--PEESPKPQPPKQEQPPKTEAPKMGSPPLESPVPNDPYDASPIKKRRPQPPSPST 631
Query: 209 AAPRFTPTGRRPPVHSSTGGVPYYTTNVSVYRGPLP 316
+ T + + PPVHS P ++ V+ P P
Sbjct: 632 EETK-TTSPQSPPVHSPPPPPPVHSPPPPVFSPPPP 666
>At2g46370.2 68415.m05771 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 575
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 257 STGGVPYYTTNVSVYRGP 310
STGGVP T +VYR P
Sbjct: 156 STGGVPVGTATTNVYRNP 173
>At2g46370.1 68415.m05770 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 575
Score = 27.1 bits (57), Expect = 6.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 257 STGGVPYYTTNVSVYRGP 310
STGGVP T +VYR P
Sbjct: 156 STGGVPVGTATTNVYRNP 173
>At1g26460.1 68414.m03227 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 630
Score = 27.1 bits (57), Expect = 6.3
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +2
Query: 191 AHAQTDAAPRFTPTGRRPPVHSSTGGVPYYTTNVSVYRGPLPNTNSVFKEAVRRGFL 361
A TD P + P + G P Y N +R P+PNT S + V GFL
Sbjct: 44 ATESTDHDPSNHQSTSTPLPPNPATGSPLYQEN---WRSPIPNTPSFNQSLVPLGFL 97
>At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein similar to human splicing
factor GB:CAA59494 GI:899298 from [Homo sapiens];
contains Pfam profile PF01805: Surp module
Length = 735
Score = 27.1 bits (57), Expect = 6.3
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Frame = +2
Query: 35 PRH*PSVN----PMHLALPSTPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRR--PSAH 196
PR PSV P L +P P + +++ + GP H + RPP R P
Sbjct: 557 PRPPPSVQYPGAPRPLGVPMMQPMYQQHQLSMSGPHGHPSMMMSRPPQMQPVMRVPPPPG 616
Query: 197 AQTDAAPRFTPTGRRPPV 250
+Q P G+ PP+
Sbjct: 617 SQFSHMQVPQPYGQLPPL 634
>At5g33230.1 68418.m03927 hypothetical protein
Length = 126
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 88 PLTHTLRTTRARPLVTYRGSRPPPPNTLQ 174
P ++ R T+++ LV + GSR P P T++
Sbjct: 32 PPSYQPRDTQSKALVIHSGSRDPVPPTIE 60
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 161 PIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSSTGGVPYY 280
P N P + P T PP SS+GG PYY
Sbjct: 40 PCQPNPSPPPPPSNPSPPPPSPTTTACPPPPSSSGGGPYY 79
>At3g11000.1 68416.m01328 expressed protein
Length = 488
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/62 (25%), Positives = 24/62 (38%)
Frame = +2
Query: 83 TPPSHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTDAAPRFTPTGRRPPVHSST 262
T PS ++ LSH + +S S+ A +T R PP+H +
Sbjct: 232 TQPSVSQSGTSYSSALSHMTASSTQEKKNSITNEGSSQACKGVENPWTSAARVPPIHQDS 291
Query: 263 GG 268
GG
Sbjct: 292 GG 293
>At1g78800.1 68414.m09184 glycosyl transferase family 1 protein
contains similarity to glycosyltransferase GI:871530
from [Saccharomyces cerevisiae], Alg2
mannosyltransferase [gi:3868942] from Rhizomucor
pusillus; contains Pfam profile: PF00534 Glycosyl
transferases group 1
Length = 403
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +3
Query: 318 IPTQYSKRPCAAVFYCYF---FLLNHTYYI--LFQKPLSF 422
+P KR VFYC+F L HT + +++KP+ F
Sbjct: 114 VPLLKLKRSSKVVFYCHFPDLLLAKHTTTLRRMYRKPIDF 153
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 26.6 bits (56), Expect = 8.4
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = +2
Query: 35 PRH*PSVNPMHLALPSTPP--SHTRYERRVRGPLSHTVVRDRRPPIHSNGRRPSAHAQTD 208
P H P++ P P P S Y + P ++T +P + + P + T
Sbjct: 50 PVHKPTLPPPVYTPPVHKPTLSPPVYTKPTLPPPAYTPPVYNKPTLPAPVYTPPVYKPTL 109
Query: 209 AAPRFTPTGRRPPVHSSTGGVPYYT 283
+ P +T PPV T P YT
Sbjct: 110 SPPVYTKPTLLPPVFKPTLSPPVYT 134
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,769,680
Number of Sequences: 28952
Number of extensions: 289185
Number of successful extensions: 988
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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