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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M09
         (458 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044     98   3e-21
02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-17...    98   3e-21
04_04_0740 - 27699609-27699761,27699864-27700004,27700094-277001...    30   0.78 
08_01_0727 + 6567935-6568112,6568197-6568912,6569061-6569162,656...    30   1.0  
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    28   4.2  
02_05_0172 + 26460884-26461084,26461168-26461391,26461726-264617...    27   5.5  
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009...    27   7.3  
05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061     27   7.3  
03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566...    27   7.3  
03_02_0134 + 5820068-5820178,5822439-5822508,5822893-5822939,582...    27   7.3  
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738     27   9.6  
02_01_0679 - 5048653-5051394                                           27   9.6  
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132     27   9.6  
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394...    27   9.6  

>09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044
          Length = 190

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = -1

Query: 254 TEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPSSAALIQQST 75
           T  NT IEIRNFLGEK +R+V M  GVT++ S K KDEL+++GN +E V  SAALI Q  
Sbjct: 105 TNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKC 164

Query: 74  TVKNKDIRKFLDGL 33
            VKNKDIRKFLDG+
Sbjct: 165 HVKNKDIRKFLDGI 178


>02_01_0029 -
           176002-176137,176495-176646,177166-177577,178010-178126,
           178260-178322,178964-179167,180605-180687,182394-182516,
           182987-183328
          Length = 543

 Score = 98.3 bits (234), Expect = 3e-21
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = -1

Query: 254 TEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPSSAALIQQST 75
           T  NT IEIRNFLGEK +R+V M  GVT++ S K KDEL+++GN +E V  SAALI Q  
Sbjct: 98  TNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKC 157

Query: 74  TVKNKDIRKFLDGL 33
            VKNKDIRKFLDG+
Sbjct: 158 HVKNKDIRKFLDGI 171


>04_04_0740 -
           27699609-27699761,27699864-27700004,27700094-27700171,
           27700298-27700399,27700492-27700548,27700690-27700788,
           27700896-27700967,27701062-27701202,27701281-27701413,
           27701623-27701690,27701770-27701775
          Length = 349

 Score = 30.3 bits (65), Expect = 0.78
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = -1

Query: 290 FQPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI--IEGNSL 117
           FQP  EF T +T    ++IE+   +    +   K    V   N  K+  +L+  +  N L
Sbjct: 180 FQPANEFLTMITEVSKSLIEVTKAIKGATVENNKFCVSVHYRNVDKKNWKLVAQVVNNVL 239

Query: 116 EDVPS 102
           +D PS
Sbjct: 240 KDFPS 244


>08_01_0727 +
           6567935-6568112,6568197-6568912,6569061-6569162,
           6569236-6569547,6569862-6570299
          Length = 581

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -1

Query: 209 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLED----VPSSAALIQQSTTVKNKDIRKFL 42
           K   RV  +PGV+ + SP     L  E N  ++    + S A  I  +     + +R  L
Sbjct: 289 KTAARVFGSPGVSNLVSPAGSSSLFTELNKFDEGCTAIKSLAVRILAAHCSTERTMRARL 348

Query: 41  DGLISHLLQQ 12
           DGL + LLQQ
Sbjct: 349 DGLKNRLLQQ 358


>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
            3536083-3536226,3536974-3537375,3537499-3537721,
            3537830-3542368,3542480-3542599,3543005-3543038,
            3543922-3544102,3544198-3544815,3545022-3551098,
            3551139-3551304,3551508-3551614,3552056-3552178,
            3553417-3553642
          Length = 5100

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = -3

Query: 99   SCPDPTINDSKEQGYQKVLGRSYISSATT 13
            SC  P   D K  GYQ VL  SYIS+A T
Sbjct: 2982 SCKVPNTKDLKLDGYQDVL-CSYISNAHT 3009


>02_05_0172 +
           26460884-26461084,26461168-26461391,26461726-26461756,
           26462247-26462834
          Length = 347

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 37  PSKNFLISLFFTVVDCWIRAAEL-GTSSNEFPSMISSSFC 153
           P +NF ++ FF  +   +  A + G+S N+ P+     +C
Sbjct: 140 PERNFALTFFFVNIQSMVTKATMKGSSGNQSPTTSLLKYC 179


>07_03_0978 +
           23099690-23100108,23100530-23100564,23100868-23100926,
           23101269-23101310,23102003-23102065,23102172-23102253,
           23102570-23102609,23102657-23102753
          Length = 278

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 43  KNFLISLFFTVVDCWIRAAELGTS 114
           ++++I LFF    CW +  EL TS
Sbjct: 154 RDYIIFLFFLATMCWYQGIELWTS 177


>05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061
          Length = 691

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/44 (22%), Positives = 25/44 (56%)
 Frame = -1

Query: 158 PKQKDELIIEGNSLEDVPSSAALIQQSTTVKNKDIRKFLDGLIS 27
           P ++ EL+    ++    +++ L+Q    + ++D+R+   GL+S
Sbjct: 399 PDEQVELLSSSRAITTTTTTSLLLQNGGQLSSEDVRRLAAGLLS 442


>03_05_0936 -
           28955486-28955683,28956320-28956424,28956550-28956693,
           28957078-28957356,28957480-28957587,28958288-28958567,
           28958724-28960029,28961301-28962342
          Length = 1153

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 443 YHLTRRRDYRFFRKYITAVPELL 375
           YHL R  DY ++R+++  V ELL
Sbjct: 864 YHLLRLYDYFYYREHLLIVCELL 886


>03_02_0134 +
           5820068-5820178,5822439-5822508,5822893-5822939,
           5823067-5823175,5823355-5823440,5823768-5823858,
           5824204-5824289,5824649-5824762
          Length = 237

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -1

Query: 146 DELIIEGNSLEDVPSSAA--LIQQSTTVKNKDIRKFLDG 36
           +EL   GNS+EDVPSS    +  +S ++    IR+ +DG
Sbjct: 166 EELQANGNSIEDVPSSICNLVCLKSLSLNGNKIRQ-MDG 203


>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
          Length = 400

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 287 QPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGVT 171
           +P  + GT    E  TII++   LG ++ +  K  PG T
Sbjct: 61  RPDLKRGTFSEQEERTIIDVHRILGNRWAQIAKHLPGRT 99


>02_01_0679 - 5048653-5051394
          Length = 913

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 141 FILLFR*IDNCHTRCHFYPPDVLFTKEV 224
           F+ L R + NC   C  +P D +F +E+
Sbjct: 420 FMYLPRHLKNCFLYCSMFPQDYIFKREL 447


>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
          Length = 5436

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -1

Query: 260 VTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLED 111
           ++ +  TI +  NF+ EK+    K+  G   +N+ K++ E   + N+L+D
Sbjct: 501 ISLQVETIEDKTNFMPEKFSELEKVYTGCEKLNNKKEEQEENDKINTLKD 550


>01_01_0538 -
           3938389-3939727,3939828-3940203,3940299-3940516,
           3940607-3940769,3940866-3941100,3941186-3941353
          Length = 832

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 290 FQPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 138
           F  +A    RV  +G  ++E R+ L E++  RVK  PG+ + +    K EL
Sbjct: 440 FTDQARKRYRVDDDG--LLEERHSLEERHSERVKYFPGIRLRSRNPLKQEL 488


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,783,329
Number of Sequences: 37544
Number of extensions: 254310
Number of successful extensions: 585
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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