BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M09 (458 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044 98 3e-21 02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-17... 98 3e-21 04_04_0740 - 27699609-27699761,27699864-27700004,27700094-277001... 30 0.78 08_01_0727 + 6567935-6568112,6568197-6568912,6569061-6569162,656... 30 1.0 09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 28 4.2 02_05_0172 + 26460884-26461084,26461168-26461391,26461726-264617... 27 5.5 07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009... 27 7.3 05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061 27 7.3 03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566... 27 7.3 03_02_0134 + 5820068-5820178,5822439-5822508,5822893-5822939,582... 27 7.3 07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 27 9.6 02_01_0679 - 5048653-5051394 27 9.6 01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 27 9.6 01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394... 27 9.6 >09_04_0566 - 18583624-18583710,18584445-18584567,18584682-18585044 Length = 190 Score = 98.3 bits (234), Expect = 3e-21 Identities = 47/74 (63%), Positives = 56/74 (75%) Frame = -1 Query: 254 TEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPSSAALIQQST 75 T NT IEIRNFLGEK +R+V M GVT++ S K KDEL+++GN +E V SAALI Q Sbjct: 105 TNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKC 164 Query: 74 TVKNKDIRKFLDGL 33 VKNKDIRKFLDG+ Sbjct: 165 HVKNKDIRKFLDGI 178 >02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-178126, 178260-178322,178964-179167,180605-180687,182394-182516, 182987-183328 Length = 543 Score = 98.3 bits (234), Expect = 3e-21 Identities = 47/74 (63%), Positives = 56/74 (75%) Frame = -1 Query: 254 TEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPSSAALIQQST 75 T NT IEIRNFLGEK +R+V M GVT++ S K KDEL+++GN +E V SAALI Q Sbjct: 98 TNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKC 157 Query: 74 TVKNKDIRKFLDGL 33 VKNKDIRKFLDG+ Sbjct: 158 HVKNKDIRKFLDGI 171 >04_04_0740 - 27699609-27699761,27699864-27700004,27700094-27700171, 27700298-27700399,27700492-27700548,27700690-27700788, 27700896-27700967,27701062-27701202,27701281-27701413, 27701623-27701690,27701770-27701775 Length = 349 Score = 30.3 bits (65), Expect = 0.78 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Frame = -1 Query: 290 FQPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELI--IEGNSL 117 FQP EF T +T ++IE+ + + K V N K+ +L+ + N L Sbjct: 180 FQPANEFLTMITEVSKSLIEVTKAIKGATVENNKFCVSVHYRNVDKKNWKLVAQVVNNVL 239 Query: 116 EDVPS 102 +D PS Sbjct: 240 KDFPS 244 >08_01_0727 + 6567935-6568112,6568197-6568912,6569061-6569162, 6569236-6569547,6569862-6570299 Length = 581 Score = 29.9 bits (64), Expect = 1.0 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Frame = -1 Query: 209 KYIRRVKMAPGVTVVNSPKQKDELIIEGNSLED----VPSSAALIQQSTTVKNKDIRKFL 42 K RV +PGV+ + SP L E N ++ + S A I + + +R L Sbjct: 289 KTAARVFGSPGVSNLVSPAGSSSLFTELNKFDEGCTAIKSLAVRILAAHCSTERTMRARL 348 Query: 41 DGLISHLLQQ 12 DGL + LLQQ Sbjct: 349 DGLKNRLLQQ 358 >09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740, 3536083-3536226,3536974-3537375,3537499-3537721, 3537830-3542368,3542480-3542599,3543005-3543038, 3543922-3544102,3544198-3544815,3545022-3551098, 3551139-3551304,3551508-3551614,3552056-3552178, 3553417-3553642 Length = 5100 Score = 27.9 bits (59), Expect = 4.2 Identities = 16/29 (55%), Positives = 17/29 (58%) Frame = -3 Query: 99 SCPDPTINDSKEQGYQKVLGRSYISSATT 13 SC P D K GYQ VL SYIS+A T Sbjct: 2982 SCKVPNTKDLKLDGYQDVL-CSYISNAHT 3009 >02_05_0172 + 26460884-26461084,26461168-26461391,26461726-26461756, 26462247-26462834 Length = 347 Score = 27.5 bits (58), Expect = 5.5 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +1 Query: 37 PSKNFLISLFFTVVDCWIRAAEL-GTSSNEFPSMISSSFC 153 P +NF ++ FF + + A + G+S N+ P+ +C Sbjct: 140 PERNFALTFFFVNIQSMVTKATMKGSSGNQSPTTSLLKYC 179 >07_03_0978 + 23099690-23100108,23100530-23100564,23100868-23100926, 23101269-23101310,23102003-23102065,23102172-23102253, 23102570-23102609,23102657-23102753 Length = 278 Score = 27.1 bits (57), Expect = 7.3 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 43 KNFLISLFFTVVDCWIRAAELGTS 114 ++++I LFF CW + EL TS Sbjct: 154 RDYIIFLFFLATMCWYQGIELWTS 177 >05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061 Length = 691 Score = 27.1 bits (57), Expect = 7.3 Identities = 10/44 (22%), Positives = 25/44 (56%) Frame = -1 Query: 158 PKQKDELIIEGNSLEDVPSSAALIQQSTTVKNKDIRKFLDGLIS 27 P ++ EL+ ++ +++ L+Q + ++D+R+ GL+S Sbjct: 399 PDEQVELLSSSRAITTTTTTSLLLQNGGQLSSEDVRRLAAGLLS 442 >03_05_0936 - 28955486-28955683,28956320-28956424,28956550-28956693, 28957078-28957356,28957480-28957587,28958288-28958567, 28958724-28960029,28961301-28962342 Length = 1153 Score = 27.1 bits (57), Expect = 7.3 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 443 YHLTRRRDYRFFRKYITAVPELL 375 YHL R DY ++R+++ V ELL Sbjct: 864 YHLLRLYDYFYYREHLLIVCELL 886 >03_02_0134 + 5820068-5820178,5822439-5822508,5822893-5822939, 5823067-5823175,5823355-5823440,5823768-5823858, 5824204-5824289,5824649-5824762 Length = 237 Score = 27.1 bits (57), Expect = 7.3 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -1 Query: 146 DELIIEGNSLEDVPSSAA--LIQQSTTVKNKDIRKFLDG 36 +EL GNS+EDVPSS + +S ++ IR+ +DG Sbjct: 166 EELQANGNSIEDVPSSICNLVCLKSLSLNGNKIRQ-MDG 203 >07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 Length = 400 Score = 26.6 bits (56), Expect = 9.6 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -1 Query: 287 QPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGVT 171 +P + GT E TII++ LG ++ + K PG T Sbjct: 61 RPDLKRGTFSEQEERTIIDVHRILGNRWAQIAKHLPGRT 99 >02_01_0679 - 5048653-5051394 Length = 913 Score = 26.6 bits (56), Expect = 9.6 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +3 Query: 141 FILLFR*IDNCHTRCHFYPPDVLFTKEV 224 F+ L R + NC C +P D +F +E+ Sbjct: 420 FMYLPRHLKNCFLYCSMFPQDYIFKREL 447 >01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 Length = 5436 Score = 26.6 bits (56), Expect = 9.6 Identities = 14/50 (28%), Positives = 28/50 (56%) Frame = -1 Query: 260 VTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLED 111 ++ + TI + NF+ EK+ K+ G +N+ K++ E + N+L+D Sbjct: 501 ISLQVETIEDKTNFMPEKFSELEKVYTGCEKLNNKKEEQEENDKINTLKD 550 >01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516, 3940607-3940769,3940866-3941100,3941186-3941353 Length = 832 Score = 26.6 bits (56), Expect = 9.6 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = -1 Query: 290 FQPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDEL 138 F +A RV +G ++E R+ L E++ RVK PG+ + + K EL Sbjct: 440 FTDQARKRYRVDDDG--LLEERHSLEERHSERVKYFPGIRLRSRNPLKQEL 488 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,783,329 Number of Sequences: 37544 Number of extensions: 254310 Number of successful extensions: 585 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 577 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 585 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 907440304 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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