Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_M09
         (458 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   2.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   3.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   9.0  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    22   9.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 349  QKNTEFIHSVF*ISTAQILSFSLVPNSARGSPLRETQLLRSVTSLVKSTSG 197
            ++N +FI      ST+ + + ++VPN  + SP   T    + T+   ST+G
Sbjct: 915  KQNLKFIDEASTPSTSAMAA-TIVPNPVQASPSPATAPAPAKTTSTDSTNG 964


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 199 LMYFSPRKLRISIIVFPSVVTLVP 270
           L+Y +    ++   VFPSVV LVP
Sbjct: 288 LLYANNAAAKLCSPVFPSVVPLVP 311


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 385 QSCYRVYKRSGD 350
           +SCYR+  R+GD
Sbjct: 581 ESCYRLMSRTGD 592


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 127 PSMISSSFCLGELTTV 174
           PS  S  FCLG+L+ V
Sbjct: 311 PSNNSDRFCLGQLSNV 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,789
Number of Sequences: 2352
Number of extensions: 10087
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)