BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M09 (458 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g10450.1 68417.m01717 60S ribosomal protein L9 (RPL90D) ribos... 92 2e-19 At1g33140.1 68414.m04093 60S ribosomal protein L9 (RPL90A/C) sim... 89 1e-18 At1g33120.1 68414.m04090 60S ribosomal protein L9 (RPL90B) simil... 89 1e-18 At3g17750.1 68416.m02265 protein kinase family protein contains ... 28 2.6 At1g66940.2 68414.m07609 protein kinase-related 27 4.6 At1g66940.1 68414.m07608 protein kinase-related 27 4.6 At4g27330.1 68417.m03921 sporocyteless (SPL) identical to sporoc... 27 6.1 At1g73460.1 68414.m08504 protein kinase family protein contains ... 27 6.1 At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 27 6.1 At5g63800.1 68418.m08007 glycosyl hydrolase family 35 protein si... 27 8.1 At1g73110.1 68414.m08453 ribulose bisphosphate carboxylase/oxyge... 27 8.1 >At4g10450.1 68417.m01717 60S ribosomal protein L9 (RPL90D) ribosomal protein L9, cytosolic - garden pea, PIR2:S19978 Length = 194 Score = 91.9 bits (218), Expect = 2e-19 Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 1/83 (1%) Frame = -1 Query: 278 AEFGTRVTTEGNT-IIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPS 102 A F + +GN IEIRNFLGEK +R+V+M GV +V S K KDE+I+EGN +E V Sbjct: 100 AHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSR 159 Query: 101 SAALIQQSTTVKNKDIRKFLDGL 33 S ALI Q VK KDIRKFLDG+ Sbjct: 160 SCALINQKCHVKKKDIRKFLDGI 182 >At1g33140.1 68414.m04093 60S ribosomal protein L9 (RPL90A/C) similar to RIBOSOMAL PROTEIN L9 GB:P49209 from [Arabidopsis thaliana] Length = 194 Score = 89.4 bits (212), Expect = 1e-18 Identities = 42/68 (61%), Positives = 52/68 (76%) Frame = -1 Query: 236 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPSSAALIQQSTTVKNKD 57 IEIRNFLGEK +R+V+M GVT+V S K KDE++++GN +E V S ALI Q VK KD Sbjct: 115 IEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKD 174 Query: 56 IRKFLDGL 33 IRKFLDG+ Sbjct: 175 IRKFLDGI 182 >At1g33120.1 68414.m04090 60S ribosomal protein L9 (RPL90B) similar to RIBOSOMAL PROTEIN L9 GB:P49209 from [Arabidopsis thaliana] Length = 194 Score = 89.4 bits (212), Expect = 1e-18 Identities = 42/68 (61%), Positives = 52/68 (76%) Frame = -1 Query: 236 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVPSSAALIQQSTTVKNKD 57 IEIRNFLGEK +R+V+M GVT+V S K KDE++++GN +E V S ALI Q VK KD Sbjct: 115 IEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKD 174 Query: 56 IRKFLDGL 33 IRKFLDG+ Sbjct: 175 IRKFLDGI 182 >At3g17750.1 68416.m02265 protein kinase family protein contains Pfam profile: PF00069 Eukaryotic protein kinase domain Length = 1138 Score = 28.3 bits (60), Expect = 2.6 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 443 YHLTRRRDYRFFRKYITAVPELL 375 YHL R DY +FR+++ V ELL Sbjct: 887 YHLLRLYDYFYFREHLLIVCELL 909 >At1g66940.2 68414.m07609 protein kinase-related Length = 309 Score = 27.5 bits (58), Expect = 4.6 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 311 INGTNLEFQPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGV 174 +N TNLE R F V NT E + LG ++ + PGV Sbjct: 184 LNVTNLESVLRKGFEVTVVINENTCQECLSSLGRCHVFNENLTPGV 229 >At1g66940.1 68414.m07608 protein kinase-related Length = 332 Score = 27.5 bits (58), Expect = 4.6 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -1 Query: 311 INGTNLEFQPRAEFGTRVTTEGNTIIEIRNFLGEKYIRRVKMAPGV 174 +N TNLE R F V NT E + LG ++ + PGV Sbjct: 184 LNVTNLESVLRKGFEVTVVINENTCQECLSSLGRCHVFNENLTPGV 229 >At4g27330.1 68417.m03921 sporocyteless (SPL) identical to sporocyteless SPL (MADS-box related protein) [Arabidopsis thaliana] gi|5566240|gb|AAD45344 Length = 314 Score = 27.1 bits (57), Expect = 6.1 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = -2 Query: 412 FSANT*RRCQSCYRVYKRSGDQKN 341 F+A++ RC +C++ + GDQ N Sbjct: 164 FNASSNNRCDTCFKKKRLDGDQNN 187 >At1g73460.1 68414.m08504 protein kinase family protein contains protein kinase domain Pfam:PF00069 Length = 1169 Score = 27.1 bits (57), Expect = 6.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 443 YHLTRRRDYRFFRKYITAVPELL 375 YHL R DY ++R+++ V ELL Sbjct: 918 YHLLRLYDYFYYREHLLIVCELL 940 >At1g73450.1 68414.m08503 protein kinase, putative similar to nuclear serine/threonine protein kinase GI:3582644 from [Rattus norvegicus] Length = 1152 Score = 27.1 bits (57), Expect = 6.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 443 YHLTRRRDYRFFRKYITAVPELL 375 YHL R DY ++R+++ V ELL Sbjct: 901 YHLLRLYDYFYYREHLLIVCELL 923 >At5g63800.1 68418.m08007 glycosyl hydrolase family 35 protein similar to beta-galactosidase GI:7939621 from [Lycopersicon esculentum]; contains Pfam profile PF01301: Glycosyl hydrolases family 35 Length = 718 Score = 26.6 bits (56), Expect = 8.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 335 VYSFCVLNINGTNLEFQPRAEFGTRVTTEGNTII 234 V+ C++ I GT LEF A VT +G ++I Sbjct: 7 VFGLCLILIVGTFLEFSGGATAAKGVTYDGRSLI 40 >At1g73110.1 68414.m08453 ribulose bisphosphate carboxylase/oxygenase activase, putative / RuBisCO activase, putative similar to ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase, RA) [Oryza sativa] SWISS-PROT:P93431 Length = 432 Score = 26.6 bits (56), Expect = 8.1 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = -3 Query: 180 WCDSCQFT*TKG*TDHRRKLIRRCTQFSCPDPTINDSKEQGYQKV 46 W D T G RRK + QF+ P+ T+ E GY + Sbjct: 367 WVDEAGGMETLGKVLLRRKKTQEVPQFTAPEQTVEALLESGYSLI 411 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,194,702 Number of Sequences: 28952 Number of extensions: 203974 Number of successful extensions: 533 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 513 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 533 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 762235320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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