Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M08
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 41 7e-05
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 28 0.70
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 28 0.70
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 27 1.2
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 2.2
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 2.8
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 2.8
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 26 2.8
SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 25 3.8
SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 25 3.8
SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.0
SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe... 25 6.6
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 25 6.6
SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|... 24 8.7
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 24 8.7
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 24 8.7
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 24 8.7
SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 24 8.7
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 41.1 bits (92), Expect = 7e-05
Identities = 36/138 (26%), Positives = 66/138 (47%)
Frame = +1
Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186
Y G+ +D ++ V S+P++ E + T K + ++ + S ++ ++ +
Sbjct: 212 YTGD-WDPASIADFIGVSSIPLLDELNQMTFGKYQQSGLPLGIIFYNS--TESRDELYDV 268
Query: 187 LKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDEL 366
+P+AK Y+D L +DA + + + M E A +IA + M KY T EL
Sbjct: 269 FQPLAKKYQDTLRFAFLDA--VRYGAVAK--QMNVESDWPAFVIANLKSMLKYPFPTTEL 324
Query: 367 SANAVEEFVQSFFAGTLE 420
+A A+ +FV F G L+
Sbjct: 325 TAKAMTKFVGDFVDGKLQ 342
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 27.9 bits (59), Expect = 0.70
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 1 VKYDGEAFDEDLFKSWVFVQSMPVIVEFSHE--TASKIFGGQIKYHLLLFLSKKADTFEK 174
+++ + + E L KS F++ + + +H T + Q+ YH L LS+ A T E
Sbjct: 689 IEWFRQRYSESLEKSQ-FLREIIISQSAAHSLPTTKPVSASQLIYHRALDLSRNAATSEL 747
Query: 175 YVEELKPVAKNYR 213
+ + +NYR
Sbjct: 748 SGNDAQACLQNYR 760
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 27.9 bits (59), Expect = 0.70
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 169 EKYVEELKPVAKNYRDKLMTVAIDADE 249
E+Y+EEL V NY+D L + + A E
Sbjct: 80 EEYIEELAAVRSNYQDALHHLILQARE 106
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 1.2
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -2
Query: 336 HVLFESDQSCRWNFFLLHAEEL*DSLVFIL 247
HV+FE+D W+ FL++ ++L ++ ++
Sbjct: 678 HVIFEADAMELWSTFLMYIQKLPETFTLLI 707
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.2 bits (55), Expect = 2.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 303 WNFFLLHAEEL*DSLVFILVGVNGDGHELVAVVLSDWFQFFYIL 172
W FF++ +E + VF+ + D L++VV +W F IL
Sbjct: 1517 WKFFMVRYDEAAFTSVFVELLRLKDSDPLLSVVKDNWLFFQTIL 1560
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 25.8 bits (54), Expect = 2.8
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 61 SMPVIVEFSHETA--SKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVA 234
SM F ET+ S++F QI +++ L K D + +KP+ DK++
Sbjct: 1439 SMGYAESFILETSGTSQLFAHQILWNMKANLYK--DEAATVPDSIKPILDRVMDKMINSL 1496
Query: 235 IDADEDEHQRILEFF 279
D+ ++R FF
Sbjct: 1497 SGEDKQFYEREFTFF 1511
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 25.8 bits (54), Expect = 2.8
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +1
Query: 121 IKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKL 222
++ HLL + +D+F ++ LK + K RD +
Sbjct: 226 VELHLLQEIENASDSFPMIIDNLKQLKKETRDNV 259
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 25.8 bits (54), Expect = 2.8
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 186 FFYI--LFKCVSFLRQEQKEMIFDLSTEDLRCGLMGELNDDGH 64
FFY + C+SF F+L+ +R + LN DGH
Sbjct: 703 FFYDKDVVYCMSFFSPHMDFNTFNLNIGPIRLNVYKHLNSDGH 745
>SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 25.4 bits (53), Expect = 3.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 157 ADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRIL 270
++ FEK VEE K + +N LM + D +IL
Sbjct: 376 SEVFEKIVEEYKNIVQNDFYDLMFKRVGLPSDSSNKIL 413
>SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation
specificity factor complex subunit
Pta1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.4 bits (53), Expect = 3.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 64 MPVIVEFSHETASKIFGGQIKYHL 135
+PV+V+ E A KI G +++HL
Sbjct: 218 LPVLVKRRKELAPKIIGSLLEFHL 241
>SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 227
Score = 25.0 bits (52), Expect = 5.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 178 VEELKPVAKNYRDKLMTVAIDADED 252
+E+++P + NY D+L TV D D
Sbjct: 1 MEQIRPFSDNYLDRLRTVEEDDYND 25
>SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 163 TFEKYVEELKPVAKNYRDKLMTVAIDADED 252
TF++YV E + + +NY D++ + I A+ +
Sbjct: 64 TFDEYVNEARRLKQNYGDQI-NILIGAETE 92
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 24.6 bits (51), Expect = 6.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 107 SSVDKSNIISFCSCLRKLTHLKS 175
SS+D S I SF +CL +L LKS
Sbjct: 49 SSIDGS-IKSFAACLHELNRLKS 70
>SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|chr
3|||Manual
Length = 418
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 252 ILVGVNGDGHELVAVVLSDWFQFFYILFKCV 160
I VG+ +LV + W +ILF CV
Sbjct: 197 IAVGLYNSKKDLVVTIWLAWVVICFILFGCV 227
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 24.2 bits (50), Expect = 8.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILE 273
+ E+ + K Y+ K + V + ADE + +LE
Sbjct: 352 FCEKRRNYIKLYKKKFLAVQLSADESKELDVLE 384
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 24.2 bits (50), Expect = 8.7
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +1
Query: 148 SKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKK 291
++K D F K + L+P A++ + ++ + + + +R+ G+K+
Sbjct: 42 TRKHDPFHKLWDRLQPKAQSTIQRTSSLPVPSSSNFKERLNNIGGLKR 89
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 252 ILVGVNGDGHELVAVVLSDWFQFFYILFKCV 160
I VG+ +LV + W +ILF CV
Sbjct: 187 IAVGLYNSKKDLVVTIWLAWVVICFILFGCV 217
>SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 835
Score = 24.2 bits (50), Expect = 8.7
Identities = 6/24 (25%), Positives = 15/24 (62%)
Frame = -3
Query: 110 KILDAVSWENSTMTGMLWTNTHDL 39
++L ++W+ +++ GM W +L
Sbjct: 80 QLLQTLTWDKTSLVGMGWNENEEL 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,683,486
Number of Sequences: 5004
Number of extensions: 30620
Number of successful extensions: 129
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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