BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0006_M08 (433 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 41 7e-05 SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 28 0.70 SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 28 0.70 SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 27 1.2 SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 2.2 SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 2.8 SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 2.8 SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 26 2.8 SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 25 3.8 SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 25 3.8 SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.0 SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe... 25 6.6 SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 25 6.6 SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|... 24 8.7 SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 24 8.7 SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 24 8.7 SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 24 8.7 SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 24 8.7 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 41.1 bits (92), Expect = 7e-05 Identities = 36/138 (26%), Positives = 66/138 (47%) Frame = +1 Query: 7 YDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEE 186 Y G+ +D ++ V S+P++ E + T K + ++ + S ++ ++ + Sbjct: 212 YTGD-WDPASIADFIGVSSIPLLDELNQMTFGKYQQSGLPLGIIFYNS--TESRDELYDV 268 Query: 187 LKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDEL 366 +P+AK Y+D L +DA + + + M E A +IA + M KY T EL Sbjct: 269 FQPLAKKYQDTLRFAFLDA--VRYGAVAK--QMNVESDWPAFVIANLKSMLKYPFPTTEL 324 Query: 367 SANAVEEFVQSFFAGTLE 420 +A A+ +FV F G L+ Sbjct: 325 TAKAMTKFVGDFVDGKLQ 342 >SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Schizosaccharomyces pombe|chr 3|||Manual Length = 830 Score = 27.9 bits (59), Expect = 0.70 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +1 Query: 1 VKYDGEAFDEDLFKSWVFVQSMPVIVEFSHE--TASKIFGGQIKYHLLLFLSKKADTFEK 174 +++ + + E L KS F++ + + +H T + Q+ YH L LS+ A T E Sbjct: 689 IEWFRQRYSESLEKSQ-FLREIIISQSAAHSLPTTKPVSASQLIYHRALDLSRNAATSEL 747 Query: 175 YVEELKPVAKNYR 213 + + +NYR Sbjct: 748 SGNDAQACLQNYR 760 >SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces pombe|chr 1|||Manual Length = 639 Score = 27.9 bits (59), Expect = 0.70 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +1 Query: 169 EKYVEELKPVAKNYRDKLMTVAIDADE 249 E+Y+EEL V NY+D L + + A E Sbjct: 80 EEYIEELAAVRSNYQDALHHLILQARE 106 >SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pombe|chr 3|||Manual Length = 983 Score = 27.1 bits (57), Expect = 1.2 Identities = 9/30 (30%), Positives = 20/30 (66%) Frame = -2 Query: 336 HVLFESDQSCRWNFFLLHAEEL*DSLVFIL 247 HV+FE+D W+ FL++ ++L ++ ++ Sbjct: 678 HVIFEADAMELWSTFLMYIQKLPETFTLLI 707 >SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 3655 Score = 26.2 bits (55), Expect = 2.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -2 Query: 303 WNFFLLHAEEL*DSLVFILVGVNGDGHELVAVVLSDWFQFFYIL 172 W FF++ +E + VF+ + D L++VV +W F IL Sbjct: 1517 WKFFMVRYDEAAFTSVFVELLRLKDSDPLLSVVKDNWLFFQTIL 1560 >SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1877 Score = 25.8 bits (54), Expect = 2.8 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +1 Query: 61 SMPVIVEFSHETA--SKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVA 234 SM F ET+ S++F QI +++ L K D + +KP+ DK++ Sbjct: 1439 SMGYAESFILETSGTSQLFAHQILWNMKANLYK--DEAATVPDSIKPILDRVMDKMINSL 1496 Query: 235 IDADEDEHQRILEFF 279 D+ ++R FF Sbjct: 1497 SGEDKQFYEREFTFF 1511 >SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces pombe|chr 1|||Manual Length = 949 Score = 25.8 bits (54), Expect = 2.8 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +1 Query: 121 IKYHLLLFLSKKADTFEKYVEELKPVAKNYRDKL 222 ++ HLL + +D+F ++ LK + K RD + Sbjct: 226 VELHLLQEIENASDSFPMIIDNLKQLKKETRDNV 259 >SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 791 Score = 25.8 bits (54), Expect = 2.8 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = -2 Query: 186 FFYI--LFKCVSFLRQEQKEMIFDLSTEDLRCGLMGELNDDGH 64 FFY + C+SF F+L+ +R + LN DGH Sbjct: 703 FFYDKDVVYCMSFFSPHMDFNTFNLNIGPIRLNVYKHLNSDGH 745 >SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 568 Score = 25.4 bits (53), Expect = 3.8 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +1 Query: 157 ADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRIL 270 ++ FEK VEE K + +N LM + D +IL Sbjct: 376 SEVFEKIVEEYKNIVQNDFYDLMFKRVGLPSDSSNKIL 413 >SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation specificity factor complex subunit Pta1|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 25.4 bits (53), Expect = 3.8 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +1 Query: 64 MPVIVEFSHETASKIFGGQIKYHL 135 +PV+V+ E A KI G +++HL Sbjct: 218 LPVLVKRRKELAPKIIGSLLEFHL 241 >SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 227 Score = 25.0 bits (52), Expect = 5.0 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 Query: 178 VEELKPVAKNYRDKLMTVAIDADED 252 +E+++P + NY D+L TV D D Sbjct: 1 MEQIRPFSDNYLDRLRTVEEDDYND 25 >SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe|chr 3|||Manual Length = 306 Score = 24.6 bits (51), Expect = 6.6 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = +1 Query: 163 TFEKYVEELKPVAKNYRDKLMTVAIDADED 252 TF++YV E + + +NY D++ + I A+ + Sbjct: 64 TFDEYVNEARRLKQNYGDQI-NILIGAETE 92 >SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosaccharomyces pombe|chr 1|||Manual Length = 811 Score = 24.6 bits (51), Expect = 6.6 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 107 SSVDKSNIISFCSCLRKLTHLKS 175 SS+D S I SF +CL +L LKS Sbjct: 49 SSIDGS-IKSFAACLHELNRLKS 70 >SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|chr 3|||Manual Length = 418 Score = 24.2 bits (50), Expect = 8.7 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -2 Query: 252 ILVGVNGDGHELVAVVLSDWFQFFYILFKCV 160 I VG+ +LV + W +ILF CV Sbjct: 197 IAVGLYNSKKDLVVTIWLAWVVICFILFGCV 227 >SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 3131 Score = 24.2 bits (50), Expect = 8.7 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = +1 Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILE 273 + E+ + K Y+ K + V + ADE + +LE Sbjct: 352 FCEKRRNYIKLYKKKFLAVQLSADESKELDVLE 384 >SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 217 Score = 24.2 bits (50), Expect = 8.7 Identities = 10/48 (20%), Positives = 26/48 (54%) Frame = +1 Query: 148 SKKADTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKK 291 ++K D F K + L+P A++ + ++ + + + +R+ G+K+ Sbjct: 42 TRKHDPFHKLWDRLQPKAQSTIQRTSSLPVPSSSNFKERLNNIGGLKR 89 >SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr 3|||Manual Length = 402 Score = 24.2 bits (50), Expect = 8.7 Identities = 11/31 (35%), Positives = 15/31 (48%) Frame = -2 Query: 252 ILVGVNGDGHELVAVVLSDWFQFFYILFKCV 160 I VG+ +LV + W +ILF CV Sbjct: 187 IAVGLYNSKKDLVVTIWLAWVVICFILFGCV 217 >SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces pombe|chr 1|||Manual Length = 835 Score = 24.2 bits (50), Expect = 8.7 Identities = 6/24 (25%), Positives = 15/24 (62%) Frame = -3 Query: 110 KILDAVSWENSTMTGMLWTNTHDL 39 ++L ++W+ +++ GM W +L Sbjct: 80 QLLQTLTWDKTSLVGMGWNENEEL 103 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,683,486 Number of Sequences: 5004 Number of extensions: 30620 Number of successful extensions: 129 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 129 length of database: 2,362,478 effective HSP length: 67 effective length of database: 2,027,210 effective search space used: 154067960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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