Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_M08
(433 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 51 5e-07
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 48 4e-06
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 39 0.002
07_03_1068 - 23732282-23732409,23733170-23733329,23733432-237335... 30 0.92
01_01_0822 - 6401993-6402133,6402542-6402708,6402865-6402966,640... 30 0.92
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519... 29 1.6
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 1.6
06_02_0041 + 10889741-10890092,10890161-10890235,10891139-108923... 29 2.1
05_03_0131 + 8779006-8779073,8779517-8779662,8779739-8780794,878... 29 2.1
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 28 2.8
05_06_0066 + 25307863-25307871,25308431-25308570,25308712-253087... 27 6.5
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 27 8.6
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 27 8.6
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 50.8 bits (116), Expect = 5e-07
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Frame = +1
Query: 4 KYDGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVE 183
K++G AF+E +V + P+I F+ + K++G IK L +F +A FE
Sbjct: 260 KFNG-AFEEKEIIQFVELNKFPLITVFTDLNSGKVYGSPIK--LQVFTFAEAYDFEDLES 316
Query: 184 ELKPVAKNYRDKLMTVAID-ADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTD 360
++ VA+ ++ K+M + +D A+E + L +G++ E+ P + KY
Sbjct: 317 MIQEVARGFKTKIMLIYVDTAEEKLAKPFLTLYGLEPEK-PTVTAFDTSKG-TKYLMEA- 373
Query: 361 ELSANAVEEFVQSFFAGTL 417
E++A +++F S GTL
Sbjct: 374 EINAKNLQDFCLSLLEGTL 392
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 47.6 bits (108), Expect = 4e-06
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Frame = +1
Query: 10 DGEAFDEDLFKSWVFVQSMPVIVEFSHETASKIFGGQIKYH------LLLFLSKKADTFE 171
D + FD D + ++ P +V F A++ + +KY +LFLS D E
Sbjct: 222 DSQDFDRDALEKFIESSGFPTVVTFDTSPANQKY--LLKYFDNAGTKAMLFLSFSDDRAE 279
Query: 172 KYVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKY-K 348
++ + A Y ++ I D Q ++FG+K+ EVP ++A +KY K
Sbjct: 280 EFRTQFHEAANQYSANNISFLI-GDVTASQGAFQYFGLKESEVPLVFILA---SKSKYIK 335
Query: 349 PTTDELSANAVEEFVQSFFAGTLETHL 429
PT + + + +++ F GTL H+
Sbjct: 336 PTVE---PDQILPYLKEFTEGTLAPHV 359
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 38.7 bits (86), Expect = 0.002
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Frame = +1
Query: 10 DGEAFDEDLFKSWVFVQSMPVIVEF-----SHETASKIFGGQIKYHLLLFLSKKADTFEK 174
D + FD + ++ S P +V F +H K F +LFL+ FE
Sbjct: 235 DSKDFDVTALEKFIDASSTPKVVTFDKNPDNHPYLLKFFQSSAA-KAMLFLNFSTGPFES 293
Query: 175 YVEELKPVAKNYRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPT 354
+ A+ ++DK + I D + Q ++FG+++++VP + + QD K
Sbjct: 294 FKSVYYGAAEEFKDKEIKFLI-GDIEASQGAFQYFGLREDQVP----LIIIQDGESKKFL 348
Query: 355 TDELSANAVEEFVQSFFAGTL 417
+ + + +++ +F G L
Sbjct: 349 KAHVEPDQIVSWLKEYFDGKL 369
>07_03_1068 -
23732282-23732409,23733170-23733329,23733432-23733543,
23733924-23734021,23734207-23734615,23734815-23734966,
23735802-23736010,23736708-23736795,23737353-23737673
Length = 558
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 214 DKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFV 393
DKL+ + DEH R++ F +++ ++ + A Y DE + + E V
Sbjct: 272 DKLICIVDGQIFDEHGRVIPFMSLEEADMLIRKRAKQSDIAANYVKVVDEEGISHLHEDV 331
Query: 394 QSFFAGT 414
+ F G+
Sbjct: 332 KPFLNGS 338
>01_01_0822 -
6401993-6402133,6402542-6402708,6402865-6402966,
6403437-6403577,6403685-6403768,6403858-6404164,
6404286-6404357
Length = 337
Score = 29.9 bits (64), Expect = 0.92
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 160 DTFEKYVEELKPVAKNYRDKLMTVAIDADEDEHQRI 267
D FE+ V+ + KNY D + A++ ED H+R+
Sbjct: 13 DKFEENVKRFIELPKNYLDTAVDTAVEFMEDIHERM 48
>09_03_0058 +
11950668-11950701,11951068-11951106,11951586-11951982,
11952016-11952314,11953743-11956795
Length = 1273
Score = 29.1 bits (62), Expect = 1.6
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +1
Query: 88 HETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAK-----NYRDKLMTVAIDADED 252
HE +K+ G I +H+ + K D + +E L + + R + + +I+ ++D
Sbjct: 359 HELQNKVEGHAILFHVQDYHETKIDKIQGKLEHLVRQMEQLGLYDERQQFIIESINREDD 418
Query: 253 EHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTD 360
FG +KE LI L+++ K T+
Sbjct: 419 LFGEEQTIFGRQKEMSELIELIVLQENSPTDKQVTE 454
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 55 VQSMPVIVEFSHETASKIFGGQIKYHLLLFLSKKADTFEKYVEELKPVAKN 207
V+ MP E ++E+ KIF + YHL D F Y+E L+ + K+
Sbjct: 753 VKVMPDAREIANESGVKIFVADVIYHLF-------DQFTTYIEGLREIEKD 796
>06_02_0041 + 10889741-10890092,10890161-10890235,10891139-10892341,
10892970-10893253,10893343-10893459,10894126-10894388,
10894557-10894725,10894838-10895110,10895674-10895718,
10896472-10896591,10896926-10896987,10897296-10897318,
10897911-10898128
Length = 1067
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 375 VSAKLIGGRFVLSHVLFESDQSCRWNFFLLHAEEL 271
++ + + RF + +LF+ D S W F +LH EL
Sbjct: 964 IAQEFLNKRFGILPILFKIDHSKLWGFKILHCLEL 998
>05_03_0131 +
8779006-8779073,8779517-8779662,8779739-8780794,
8781070-8781232,8781423-8781494,8782076-8782147,
8782643-8782815,8782958-8783163,8783277-8783403,
8783793-8783864,8783984-8784176,8784298-8784768,
8785635-8785740
Length = 974
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 329 KTWLSTNRPPMSLALTLLRNSCNRSSLELL 418
+ WLS+ R ++A ++R+ CN SS+E++
Sbjct: 828 RDWLSSGRGIEAIADPMIRDDCNLSSVEMV 857
>09_01_0178 -
2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 214 DKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAK 342
DK+ + +D DED R+L + KK P+ +LE ++AK
Sbjct: 652 DKIHLMLLDEDEDPCIRLLSY--CKKHRQPSTERPSLESNLAK 692
>05_06_0066 +
25307863-25307871,25308431-25308570,25308712-25308754,
25308994-25310022
Length = 406
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 208 YRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVE 384
Y K +A+DA+ D+ + L GM+ +E+ A+L + + D+A + EL A E
Sbjct: 218 YELKAKLIAMDAEADDLRASLATKGMEIDEL-RAKLTSKDADIAAVEADNAELMKMAEE 275
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 133 LLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE 249
+LLFL + D F+ Y EEL+ ++ RD + V DE
Sbjct: 85 ILLFLHRVVDVFKHYFEELE--EESLRDNFVVVYELLDE 121
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 133 LLLFLSKKADTFEKYVEELKPVAKNYRDKLMTVAIDADE 249
+LLFL + D F+ Y EEL+ ++ RD + V DE
Sbjct: 84 ILLFLHRVVDVFKHYFEELE--EESLRDNFVVVYELLDE 120
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,065,404
Number of Sequences: 37544
Number of extensions: 197861
Number of successful extensions: 607
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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